Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00558 ATGAAAGCTTTGTTATTGATCAGTCCATCATCATATCAAAACTCTGCAAAAGCAGCCATAGCTATAACCTTCATTGCTATCATTTTATTCATATCATCCATTATTTATGTTATTAGATTTTCTCAATATTATCGCAAAAGAACTCCCTCATTCCCGCTGCTTCCACCTGGCCCAAAGCCATGGCCTCTCCTTGGTTGCCTTCCAGCAATGTTGAGCAACAAAGACTTGCCAACACACCAATGGATCCATTCAATTATGAAGGAATTCAACACTGAAATTGCTTGCATCCGTCTCGGATTAAATACTCACATAATTCCTGTAACTTCTCCAGAACTTGCTCTTGAATTTCTAAACACACATGATTCTGTCTTTGGATCACGACCCATTTCCATGACTGCGGAGATATTGAGTCGCGGATATCTCAGTACAGTTCTTTCACCCATGGGGGATCAATGGAAGAAAATGAGAAGGATACTTGTTTCTCAAGTACTCAATCCTTCAACCCTCCATCGGATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTTCGCTACATTTTCATCCTTACAAGAAATGGAGAAGCCGTTGACATAAGAAGCATTACACAACATTATTGTGGTAACATTATTAGAAGAATGATGTTTAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGACCAACTTTTGAAGAAGAAGGCCATAATCAAGCATTGCTTACCATTCTTAAGCATGTTAATGCATTTTCTATATCAGATTTCATACCTTTTTTGAAGCCATTGGATTTGGATGGACATGGAAAGATTCTAGAAAAGGCTTTGAATTTCATAAGAAGGTATGATGATCCTATTATAGACGAAAGATTGCAGCAATGGAAAGATGGGAAGAAGAAAGAGGTCGAGGAAGACGACGTTCTTGATATCCTCCTCTCACTTAAAGATGAGAATGGAAAATCATTGTTGTCAATCGATGAGATTAAGGCCCAAATCATGGTAAGCATTTTCTAG 1014 38.46 MKALLLISPSSYQNSAKAAIAITFIAIILFISSIIYVIRFSQYYRKRTPSFPLLPPGPKPWPLLGCLPAMLSNKDLPTHQWIHSIMKEFNTEIACIRLGLNTHIIPVTSPELALEFLNTHDSVFGSRPISMTAEILSRGYLSTVLSPMGDQWKKMRRILVSQVLNPSTLHRMLGQRTKEADTLLRYIFILTRNGEAVDIRSITQHYCGNIIRRMMFNRRYYGKGREDGGPTFEEEGHNQALLTILKHVNAFSISDFIPFLKPLDLDGHGKILEKALNFIRRYDDPIIDERLQQWKDGKKKEVEEDDVLDILLSLKDENGKSLLSIDEIKAQIMVSIF 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7133351 7134364 + Lsi06G005580.1 Lsi06g00558 665288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00558 337 Pfam Cytochrome P450 55 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00558 337 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 28 333 - -
Lsi06g00558 337 Gene3D Cytochrome P450 40 337 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00558 337 PANTHER PHENYLALANINE N-MONOOXYGENASE 28 333 - -
Lsi06g00558 337 SUPERFAMILY Cytochrome P450 49 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g00558 Lsi-Chr6:7133351 Lsi06g00567 Lsi-Chr6:7375060 2.59E-168 dispersed
Lsi06g00557 Lsi-Chr6:7103593 Lsi06g00558 Lsi-Chr6:7133351 6.35E-42 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00558 - K12153 csv:101216819 473.781