Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00559 | ATGTCAACGCCTCATTTGGAGCTACAAATTGCAACGATAGATAATCCTTCAAATGCAGTGGAATGGACAATGGCGGAGTTACTCAATGAACAAAAAATTCTCAAGAAAGCTATTAAAGAATTGGATGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCTGATATCTCAAAACTCAAGTATCTCACAGCTTGTGCAAGGGAATCTTTTCGTCTTCATCCATTTTCATCCTTCAATGTTCCTCATGTTTCCAACTCTGACATTGTCGTGGCTGGCTACTTCATCCCAAAAGGTAGTCAAGTTTTGCTATCTCGTATAGGTCTTGGGCGAAACCCAAGGATTTGGGAAGATCCATTGAGATTTGATCCAGAACGTCATCTAAAAGATGGAACAGTTGAATTAGGAATTTCGGAACCCAATCTTAGATTCATCACCTTCACTAGAGGGAGGAGAGGTTGTGTTGGTACCTTACTTGGCACTAACATTACAATGATGTTACTTGCTAGACTTGTACAAGGATTTTCATGGAGCTTATTGCCAGGAATCACAAAAATAGATTTCTATGGAACTCGTGAACTCCCTCTACCAAAGCCATTGCATTTGCATGCAGAACCACGTCTATCTCATAGTATGTACCAAACACTTATTGGTCATCAACCATAA | 663 | 39.67 | MSTPHLELQIATIDNPSNAVEWTMAELLNEQKILKKAIKELDEVVGRERLVQESDISKLKYLTACARESFRLHPFSSFNVPHVSNSDIVVAGYFIPKGSQVLLSRIGLGRNPRIWEDPLRFDPERHLKDGTVELGISEPNLRFITFTRGRRGCVGTLLGTNITMMLLARLVQGFSWSLLPGITKIDFYGTRELPLPKPLHLHAEPRLSHSMYQTLIGHQP | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7135816 | 7136702 | + | Lsi06G005590.1 | Lsi06g00559 | 665289 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00559 | 220 | SUPERFAMILY | Cytochrome P450 | 7 | 206 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PRINTS | E-class P450 group I signature | 143 | 153 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PRINTS | E-class P450 group I signature | 153 | 176 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PRINTS | E-class P450 group I signature | 20 | 46 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PRINTS | E-class P450 group I signature | 104 | 128 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PRINTS | E-class P450 group I signature | 63 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 6 | 212 | - | - | |
Lsi06g00559 | 220 | Gene3D | Cytochrome P450 | 5 | 214 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 6 | 212 | - | - | |
Lsi06g00559 | 220 | Pfam | Cytochrome P450 | 5 | 198 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00559 | 220 | Coils | Coil | 24 | 44 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g00559 | Lsi-Chr6:7135816 | Lsi06g00563 | Lsi-Chr6:7194034 | 2.22E-128 | dispersed | |
Lsi06g00559 | Lsi-Chr6:7135816 | Lsi06g00560 | Lsi-Chr6:7152151 | 6.27E-108 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00559 | - | K12153 | csv:101215911 | 358.607 |