Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00561 ATGAGCCCAATGAGAATGCAAAATCGTTGTTGTCGATCGAAGAGATTAAAGCTCAAATCGCGTGGAATGGACAATGGTAGAAATGATGAATCAACCAAAAATTTCCAGAAAGTCGTTGAAGAATTGGACGAAGTAGTTGGAAGAAAAAGACTAGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACAGCTTGCATTAGAGAATCTTTTCGACTTTATCCATTTTCACCTTTCAATATTCCTCATGTCTCAAACTCGGACATCATTGTGGATGGTTACTTTATTCTCAAAGGTAGTGAAGTCTTACTCAGTCGTCTAGGTCTTGGTCGAAATCCAAGAATTTGGGAGGATCCAATCAGATTTAATCCAGAACGTCACCTAAAAGATGAGACAGTTGAATTGGGACTATCAGAACCAAGTCTTCAATTTATCACCTTCACTAGAGGGAGGAGAGGCTACATTGGTAGCTCTCTGGGCACTAACATTAGCATGATGCTATTTGCTAGACTTCTACAA 519 39.11 MSPMRMQNRCCRSKRLKLKSRGMDNGRNDESTKNFQKVVEELDEVVGRKRLVQESDIPKLKYLTACIRESFRLYPFSPFNIPHVSNSDIIVDGYFILKGSEVLLSRLGLGRNPRIWEDPIRFNPERHLKDETVELGLSEPSLQFITFTRGRRGYIGSSLGTNISMMLFARLLQ 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7172847 7175565 - Lsi06G005610.1 Lsi06g00561 665291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00561 173 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 PRINTS E-class P450 group I signature 154 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 PRINTS E-class P450 group I signature 105 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 PRINTS E-class P450 group I signature 64 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 SUPERFAMILY Cytochrome P450 35 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 PANTHER PHENYLALANINE N-MONOOXYGENASE 33 173 - -
Lsi06g00561 173 Pfam Cytochrome P450 36 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 Gene3D Cytochrome P450 33 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00561 173 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 33 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g00561 Lsi-Chr6:7172847 Lsi06g00564 Lsi-Chr6:7283364 2.83E-82 dispersed
Lsi06g00560 Lsi-Chr6:7152151 Lsi06g00561 Lsi-Chr6:7172847 1.60E-69 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00561 - K12153 csv:101215911 238.424