Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00563 | ATGGAAGCTGCTTTCTTATTCATTAGTCAATTGGCACACCAAAACTCTCCAATAGCTATAAGGTCCAAAACTTTCATTGTGTTTGCATTTATGGCTTTCACTTCTATCATGTTTTTCCAATTTTATAACTACAGAAGAAAACACTCAGCTCAGCAACCACCTCTCCCACCAGGCCCAAAGCCATGGCCTCTTGTTGGCTGCATCCCAGCAATGTTCTTGAGGAACAACTCCTCAACTCACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATAGCTTCCATACGCCTTGGAAATATTTACATAATCCCTGTCATTTCTCCAGAACTTGCTCTTCAGTTCCTTAAGACATATGATTCTGTTTTTGCATCACGTTCCTCCATTTCCAACACTGTTGATATCTTATCCCGTGGATATGTCTCAACAATATTTTCACCGTTAGGAGACCAATGGAAGAAGATGAGAAGAATTCTCACATCAGAAATACTCAATCCATCAACTCTCCATCGAATGCTTGGCCAAAGAACCGCCGAAGCCGATATTCTTTTACGCTATATTTTCACCCAAACCAGTAAAAATGGAGGAGGTGCAGTGATTAATGTTAGAAGTATAACACAACATTATTGTGGTAATATTATCAGAAGAATGCTATTCAATAGAAGATACTATGGCAATGGGAGGGAAGATGGGGGGCCAACTTTTGCAGAAGAAGAGCATAATCAAGCATTGTTGACCATTATTAGGCATGCTAATGCATTTTCTATATCAGATTTCATTCCTTGTTTGAAGTCTTTTGATTTAGATGGACATCTAAAAATTATGAAGAAGGCTTTGAATGTCCTTAAAAAATATGATGAACCCATTATAGATGAAAGAGTGCAACAATGGAAGAAAGACGAGAAAATAGAAGGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATGAAAATTCATTGTTGTCAATGGACGAGATCAAGGCTCAAATCACGGACCTACAAATTGCAACGATAGATAATCCTTCAAACGCAGTGGAATGTGTAATGGCGGAATTACTCAATCAACCAAAAATTCTTGAAAAAGCCATTGAAGAATTGGACGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACCGCTTGTGCTCGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACGTTTCCAACTCTGACATTGTTGTGGATGGCTACTTTATTCCTAAAGGAAGTGAAATATTGCTCAGTCGTTCAGGTCTTGGCCGAAATCCAAGGATTTGGAAGAATCCAATGAGATTTGATCCAGAACGTCATCTAAAAGATGGGACAGTTGACATGGGAATTTCAGAACCCAATTTGCGATTCATCACCTTCACTAGAGGGAGGAGAGGTTGTGTTGGTAGCTCATTGGGCACTAACATTACCATGATGTTATTTGCTAGACTTCTTCAAGGGTTTTCATGGAGTTTATTGCCAGGAATCACAAAAATAGACTTTTTTGAAACTCATGATCTCTCTCTCTCGGAGCCATTGCATTTGCATGCAAAACCACGTTTATCTCATAGTATGTACCCAAGGCTTTATTGA | 1641 | 38.82 | MEAAFLFISQLAHQNSPIAIRSKTFIVFAFMAFTSIMFFQFYNYRRKHSAQQPPLPPGPKPWPLVGCIPAMFLRNNSSTHQWIHSVMKQFNTEIASIRLGNIYIIPVISPELALQFLKTYDSVFASRSSISNTVDILSRGYVSTIFSPLGDQWKKMRRILTSEILNPSTLHRMLGQRTAEADILLRYIFTQTSKNGGGAVINVRSITQHYCGNIIRRMLFNRRYYGNGREDGGPTFAEEEHNQALLTIIRHANAFSISDFIPCLKSFDLDGHLKIMKKALNVLKKYDEPIIDERVQQWKKDEKIEGVEDILDILISLKDENENSLLSMDEIKAQITDLQIATIDNPSNAVECVMAELLNQPKILEKAIEELDEVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVSNSDIVVDGYFIPKGSEILLSRSGLGRNPRIWKNPMRFDPERHLKDGTVDMGISEPNLRFITFTRGRRGCVGSSLGTNITMMLFARLLQGFSWSLLPGITKIDFFETHDLSLSEPLHLHAKPRLSHSMYPRLY | 546 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7194034 | 7196108 | - | Lsi06G005630.1 | Lsi06g00563 | 665293 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00563 | 546 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 30 | 541 | - | - | |
Lsi06g00563 | 546 | Pfam | Cytochrome P450 | 56 | 528 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | Gene3D | Cytochrome P450 | 41 | 539 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 30 | 541 | - | - | |
Lsi06g00563 | 546 | SUPERFAMILY | Cytochrome P450 | 56 | 536 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 330 | 347 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 393 | 411 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00563 | 546 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g00559 | Lsi-Chr6:7135816 | Lsi06g00563 | Lsi-Chr6:7194034 | 2.22E-128 | dispersed | |
Lsi06g00563 | Lsi-Chr6:7194034 | Lsi06g00565 | Lsi-Chr6:7327359 | 0 | dispersed | |
Lsi06g00562 | Lsi-Chr6:7176065 | Lsi06g00563 | Lsi-Chr6:7194034 | 3.70E-41 | tandem | |
Lsi06g00563 | Lsi-Chr6:7194034 | Lsi06g00564 | Lsi-Chr6:7283364 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00563 | - | K12153 | csv:101215911 | 884.019 |