Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00565 ATGGAAGCTGCTTTCTTGTTCATTAGTCAATTGGCACACCAAAACTCTCCAATAGCCATATCCAAAACTTTCATTGTGTTTGTATTTATGACTTTTACTTCTATTATGTTCTCCCAATGTTATAACCGCAGAAGAAATCACTTAGTTCGAAAAACACCTCTTCCACCAGGCCCAAAGCCATTGCCTCTCGTTGGTTGCCTTCCAGCAATGTTGTCAAGGAACAACTCCTCAACACATCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCTACCATACGCCTTGGAAATACTTACATAATCCCCGTCACTTCTCCAGAACTCGCTCTTCAATTTCTTAAGACATATGATTCTGTCTTTGCATCACGTTCCTCTATTTCCAATGTTGTTGAAATCTTAACACGTGGATATATCTCCACAATATTTTCACCATTGGGAGATCAATGGAAGAAGATGCGAAGAATTCTCGCATCAGAAATACTCAATCCATCAACTCTCCAACGAATGCTTGGCCAAAGAACTGGCGAAGCTGATACTCTTTTACGATATATTTTCACCCAAACCAATAATAATGAAGGAGGTGCAGTGATTAATGTTAGAAGCATAACACAACATTATTGCGGTAACATTATCCGAAGAATGTTATTCAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGGCATGTTAATGCATTTTCTATATCAGATTTCATGCCTTGTTTGAAGCCTTTTGATTTAGACGGACATCAGAAAACTATGAAAAATGCTTTGAATGTCCTTCGAAAGTATGACGACCTCATTATAGATGAGAGAGTGCAACAATGGAAGAAAGACGAGAAAATAGACAGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGGAAATGCAAATTCATTGTTGTCAATTGAAGAGATCAAGGCTCAAATCACAGACTTACAAGTTGCAACGATAGATAATCCTTCAAACGCAGTGGAATGGGCAATGGCAGAATTAATCAACCAACCAAAAATTCTTGAAAAGGCCGTTGAAGAATTGGACGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCACGTTGCCACCTCTGATATCATTGTGGCTGGCTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGGTCAGGTCTTGGTCGAAATCCAAGGATTTGGGAGGATCCAATGAGATTTGGTCCAGAACGTCATCTAAAAGATGGGACAGCTGATTTGGGAATTTCAGAACCCAATTTGCGATTCATCACTTTCACTAGAGGAAGGAGAGGTTGTGCTGGTAGCTCACTTGGCACTAACATTACCATGATGTTGTTTGCTAGACTTCTACAAGGGTTTTCATGGAGTTTAATGCCAGGAATCACTAAGATAGACCTTTCTGATACTGATGATCTCTCTCTCTCGAAGCCATTGCATTTGCATGCAGAGCCACGTTTATCTCACAGTATGTACCCAAAGCTTTAA 1635 39.45 MEAAFLFISQLAHQNSPIAISKTFIVFVFMTFTSIMFSQCYNRRRNHLVRKTPLPPGPKPLPLVGCLPAMLSRNNSSTHQWIHSVMKQFNTEIATIRLGNTYIIPVTSPELALQFLKTYDSVFASRSSISNVVEILTRGYISTIFSPLGDQWKKMRRILASEILNPSTLQRMLGQRTGEADTLLRYIFTQTNNNEGGAVINVRSITQHYCGNIIRRMLFNRRYYGKGREDGGPTFEEEEHNQALLTILRHVNAFSISDFMPCLKPFDLDGHQKTMKNALNVLRKYDDLIIDERVQQWKKDEKIDRVEDILDILISLKDGNANSLLSIEEIKAQITDLQVATIDNPSNAVEWAMAELINQPKILEKAVEELDEVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVATSDIIVAGYFIPKGSEVLLSRSGLGRNPRIWEDPMRFGPERHLKDGTADLGISEPNLRFITFTRGRRGCAGSSLGTNITMMLFARLLQGFSWSLMPGITKIDLSDTDDLSLSKPLHLHAEPRLSHSMYPKL 544
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 7327359 7329648 - Lsi06G005650.1 Lsi06g00565 665295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00565 544 Gene3D Cytochrome P450 47 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 Pfam Cytochrome P450 55 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 116 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PANTHER PHENYLALANINE N-MONOOXYGENASE 29 540 - -
Lsi06g00565 544 SUPERFAMILY Cytochrome P450 55 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00565 544 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 29 540 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g00557 Lsi-Chr6:7103593 Lsi06g00565 Lsi-Chr6:7327359 2.49E-44 dispersed
Lsi06g00563 Lsi-Chr6:7194034 Lsi06g00565 Lsi-Chr6:7327359 0 dispersed
Lsi06g00565 Lsi-Chr6:7327359 Lsi06g00567 Lsi-Chr6:7375060 0 dispersed
Lsi06g00564 Lsi-Chr6:7283364 Lsi06g00565 Lsi-Chr6:7327359 0 tandem
Lsi06g00565 Lsi-Chr6:7327359 Lsi06g00566 Lsi-Chr6:7352858 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00565 - K12153 csv:101215911 874.004