Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00565 | ATGGAAGCTGCTTTCTTGTTCATTAGTCAATTGGCACACCAAAACTCTCCAATAGCCATATCCAAAACTTTCATTGTGTTTGTATTTATGACTTTTACTTCTATTATGTTCTCCCAATGTTATAACCGCAGAAGAAATCACTTAGTTCGAAAAACACCTCTTCCACCAGGCCCAAAGCCATTGCCTCTCGTTGGTTGCCTTCCAGCAATGTTGTCAAGGAACAACTCCTCAACACATCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCTACCATACGCCTTGGAAATACTTACATAATCCCCGTCACTTCTCCAGAACTCGCTCTTCAATTTCTTAAGACATATGATTCTGTCTTTGCATCACGTTCCTCTATTTCCAATGTTGTTGAAATCTTAACACGTGGATATATCTCCACAATATTTTCACCATTGGGAGATCAATGGAAGAAGATGCGAAGAATTCTCGCATCAGAAATACTCAATCCATCAACTCTCCAACGAATGCTTGGCCAAAGAACTGGCGAAGCTGATACTCTTTTACGATATATTTTCACCCAAACCAATAATAATGAAGGAGGTGCAGTGATTAATGTTAGAAGCATAACACAACATTATTGCGGTAACATTATCCGAAGAATGTTATTCAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGGCATGTTAATGCATTTTCTATATCAGATTTCATGCCTTGTTTGAAGCCTTTTGATTTAGACGGACATCAGAAAACTATGAAAAATGCTTTGAATGTCCTTCGAAAGTATGACGACCTCATTATAGATGAGAGAGTGCAACAATGGAAGAAAGACGAGAAAATAGACAGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGGAAATGCAAATTCATTGTTGTCAATTGAAGAGATCAAGGCTCAAATCACAGACTTACAAGTTGCAACGATAGATAATCCTTCAAACGCAGTGGAATGGGCAATGGCAGAATTAATCAACCAACCAAAAATTCTTGAAAAGGCCGTTGAAGAATTGGACGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCACGTTGCCACCTCTGATATCATTGTGGCTGGCTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGGTCAGGTCTTGGTCGAAATCCAAGGATTTGGGAGGATCCAATGAGATTTGGTCCAGAACGTCATCTAAAAGATGGGACAGCTGATTTGGGAATTTCAGAACCCAATTTGCGATTCATCACTTTCACTAGAGGAAGGAGAGGTTGTGCTGGTAGCTCACTTGGCACTAACATTACCATGATGTTGTTTGCTAGACTTCTACAAGGGTTTTCATGGAGTTTAATGCCAGGAATCACTAAGATAGACCTTTCTGATACTGATGATCTCTCTCTCTCGAAGCCATTGCATTTGCATGCAGAGCCACGTTTATCTCACAGTATGTACCCAAAGCTTTAA | 1635 | 39.45 | MEAAFLFISQLAHQNSPIAISKTFIVFVFMTFTSIMFSQCYNRRRNHLVRKTPLPPGPKPLPLVGCLPAMLSRNNSSTHQWIHSVMKQFNTEIATIRLGNTYIIPVTSPELALQFLKTYDSVFASRSSISNVVEILTRGYISTIFSPLGDQWKKMRRILASEILNPSTLQRMLGQRTGEADTLLRYIFTQTNNNEGGAVINVRSITQHYCGNIIRRMLFNRRYYGKGREDGGPTFEEEEHNQALLTILRHVNAFSISDFMPCLKPFDLDGHQKTMKNALNVLRKYDDLIIDERVQQWKKDEKIDRVEDILDILISLKDGNANSLLSIEEIKAQITDLQVATIDNPSNAVEWAMAELINQPKILEKAVEELDEVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVATSDIIVAGYFIPKGSEVLLSRSGLGRNPRIWEDPMRFGPERHLKDGTADLGISEPNLRFITFTRGRRGCAGSSLGTNITMMLFARLLQGFSWSLMPGITKIDLSDTDDLSLSKPLHLHAEPRLSHSMYPKL | 544 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7327359 | 7329648 | - | Lsi06G005650.1 | Lsi06g00565 | 665295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00565 | 544 | Gene3D | Cytochrome P450 | 47 | 540 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | Pfam | Cytochrome P450 | 55 | 525 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 433 | 457 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 116 | 135 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 392 | 410 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 29 | 540 | - | - | |
Lsi06g00565 | 544 | SUPERFAMILY | Cytochrome P450 | 55 | 535 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00565 | 544 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 29 | 540 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g00557 | Lsi-Chr6:7103593 | Lsi06g00565 | Lsi-Chr6:7327359 | 2.49E-44 | dispersed | |
Lsi06g00563 | Lsi-Chr6:7194034 | Lsi06g00565 | Lsi-Chr6:7327359 | 0 | dispersed | |
Lsi06g00565 | Lsi-Chr6:7327359 | Lsi06g00567 | Lsi-Chr6:7375060 | 0 | dispersed | |
Lsi06g00564 | Lsi-Chr6:7283364 | Lsi06g00565 | Lsi-Chr6:7327359 | 0 | tandem | |
Lsi06g00565 | Lsi-Chr6:7327359 | Lsi06g00566 | Lsi-Chr6:7352858 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00565 | - | K12153 | csv:101215911 | 874.004 |