Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g00567 TTCTTATTATTCATATCTTCCATTATTATTTATGTTATTAAGTTCTCTCAATATTACCGCAAAACAACTCCCTCAATCCGGTGGCTTCCACCTGGCCCAAACCCATGGCCTCTCCTCGGCTCCCTTCCAGCAATGTTGACCAACAAAAACTTGCCAACACACCAATGGATTCATGCAATAATGAAGCAATTCAACACTGAAATTGCTTGTATTCGTCTCGGACCAAATACCCACATAATCCCTACACATGATTCTATCTTCGGATCACGGCCGATTTCGATGACTGCCGAGATATTGAGTTGTGGATATCTCAGTGCAGTTCTTTCACCTATGGGGGATCAATGGAAGAAGATGAGAAGAATACTTGTTTCTCATGTAACCAATCCTTCAACCCTTCATCAAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTTTACACTACATTTTTAGCCTCACTAGAAATGGTGAAGCGATCAACATAAGAAGCATTACACAACATTATTGCGGTAATATTATTAGAAGAATGGTGTTTAATAGAAGATACTATGGAAAAGGGAGGGAAGATAGGGGAGCATCTTTCGAAGAAGAGAACCATAATCAAGCACTGTTTACGATTCTAATGCATCTTAATGCATTTTCCATATCAGATTTTATGCCTTGTTTGAAGCCATTTGATTTGGATGGACACGAAAAGATAGTGAAAAGGGCTTTTAAAGTCATAAGAGATCTTGACGAACCCATTATAGACAAAAGAGTTCAAGAGTGGAAAGATGAGAAGAGACAAGAGGCCGATGACATTCTTGATATCCTTATCTCACTCAAAAATGAGAATGGTAAACCAATGTTGTCAATCGACAAGATTAAGGCTCAAGAGCTGCAACTTGCAACCATAGACAATCCTTCAAACATTGTGGAATGGGCAATGACAGAGTTACTCAATCAACCAAAGATTCTCCAAAAAGCTGTTGAAGAATTGGACCAAGTAGTTGGAAGAAGTAAGTTGGTTCAAGAATCGGATATACCTAATCTCAAATATCTCATAGCTTGTATTAGAGAATCTTTTCGACTTCATCTAGTTTCACCATTCAATGTTCCTCATGTTTCCAATTGTGACATTGTTGTGGATGGCTACTTCATCCCTAAAGGTAGCCAAGTTTTGTTATCTTGTCCGAGTCTCGGTCGAAATCCAAGGATTTGGGAAGATCCAATGAGATTTGATCTAGAACGTCATTTAAAAGATGGAACAGTTGAATTTGGAATTTTAGATCCCAATCTGGGATTCATCACCTTCACTAGAGGAAGAAGAGGATGCCTTGGTAGCTCACTTGGCATTAACATTACCATGATGCTATTTGCTAGACTTCTACAAGGTTTTCCATGGAGCTTATTGCCAGGAATCACAAAAATAGATTTCTCTAAAACCGATGAACTTTGTCTTTCGAAGCCATTACATTTGCATGCAGAGCCACGTTTATCTCATATTATGTATCCAACTTATTGA 1506 38.51 FLLFISSIIIYVIKFSQYYRKTTPSIRWLPPGPNPWPLLGSLPAMLTNKNLPTHQWIHAIMKQFNTEIACIRLGPNTHIIPTHDSIFGSRPISMTAEILSCGYLSAVLSPMGDQWKKMRRILVSHVTNPSTLHQMLGQRTKEADTLLHYIFSLTRNGEAINIRSITQHYCGNIIRRMVFNRRYYGKGREDRGASFEEENHNQALFTILMHLNAFSISDFMPCLKPFDLDGHEKIVKRAFKVIRDLDEPIIDKRVQEWKDEKRQEADDILDILISLKNENGKPMLSIDKIKAQELQLATIDNPSNIVEWAMTELLNQPKILQKAVEELDQVVGRSKLVQESDIPNLKYLIACIRESFRLHLVSPFNVPHVSNCDIVVDGYFIPKGSQVLLSCPSLGRNPRIWEDPMRFDLERHLKDGTVEFGILDPNLGFITFTRGRRGCLGSSLGINITMMLFARLLQGFPWSLLPGITKIDFSKTDELCLSKPLHLHAEPRLSHIMYPTY 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7375060 7377904 - Lsi06G005670.1 Lsi06g00567 665297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g00567 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 497 - -
Lsi06g00567 501 Coils Coil 258 278 - -
Lsi06g00567 501 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 Pfam Cytochrome P450 30 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g00567 501 PANTHER PHENYLALANINE N-MONOOXYGENASE 8 497 - -
Lsi06g00567 501 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g00558 Lsi-Chr6:7133351 Lsi06g00567 Lsi-Chr6:7375060 2.59E-168 dispersed
Lsi06g00560 Lsi-Chr6:7152151 Lsi06g00567 Lsi-Chr6:7375060 0 dispersed
Lsi06g00564 Lsi-Chr6:7283364 Lsi06g00567 Lsi-Chr6:7375060 0 dispersed
Lsi06g00565 Lsi-Chr6:7327359 Lsi06g00567 Lsi-Chr6:7375060 0 dispersed
Lsi06g00567 Lsi-Chr6:7375060 Lsi01g00721 Lsi-Chr1:5720652 1.43E-67 dispersed
Lsi06g00566 Lsi-Chr6:7352858 Lsi06g00567 Lsi-Chr6:7375060 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g00567 - K12153 csv:101216819 768.074