Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00634 | ATGGCTACTCAGGCACTTGTTTCATCTTCTTTAACCTCTTCAGTGGGTGCAGCCAGACAGAGATTAGGGGCAAAACCGTCTTTTGGATCCAACAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGGAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTCGCTTCAAAACAAAGTCTTACTTACTTGGATGGAAGTCTCCCGGGCGATTACGGGTTCGACCCATTGGGGCTATCGGACCCTGAAGGAACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGTGAGGTGATCAACGGGCGGTACGCGATGTTGGGAGCAGTAGGAGCCATTGCCCCAGAGATCCTTGGATCATTAGGGTTAATCCCACCCGAAACAGCCCTCCCATGGTTCAAAACAGGGGTGATCCCACCAGCAGGAACCTACAATTATTGGGCAGACCCATACACACTGTTTGTATTTGAAATGGCTCTAATGGGCTTCGCTGAACATAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGGAAACAATACTTTTTGGGGCTTGAGAAGTTCTTGGGTGGTTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCATTAGGGTTTGGAAAAGATGAGAAGTCATTGAAGGATTTGAAGCTGAAGGAAGTGAAAAATGGAAGGCTTGCAATGTTGGCAATATTAGGTTATTTTGTACAAGGTCTTGTCACTGGTGTTGGGCCTTACCAAAACCTTTTGGATCATTTGTCTGACCCAGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG | 822 | 47.93 | MATQALVSSSLTSSVGAARQRLGAKPSFGSNRKSASFVVRAGATPPVKQGADRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9269531 | 9272162 | + | Lsi06G006340.1 | Lsi06g00634 | 665364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00634 | 273 | Pfam | Chlorophyll A-B binding protein | 64 | 242 | IPR022796 | - | |
Lsi06g00634 | 273 | SUPERFAMILY | Chlorophyll a-b binding protein | 52 | 269 | - | - | |
Lsi06g00634 | 273 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 272 | IPR001344 | GO:0009765|GO:0016020 | |
Lsi06g00634 | 273 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 272 | - | - | |
Lsi06g00634 | 273 | Gene3D | Chlorophyll a/b binding protein domain | 54 | 272 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g00634 | Lsi-Chr6:9269531 | Lsi08g01472 | Lsi-Chr8:22846371 | 1.05E-52 | dispersed | |
Lsi06g00634 | Lsi-Chr6:9269531 | Lsi06g01458 | Lsi-Chr6:25126453 | 2.47E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00634 | K08909 | - | csv:101202993 | 524.242 |