Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g00651 | ATGGAGCATTTCCTTATCTCTCTCTTAATACTCTTCCTCTTCTTCCTCTCTCTCACTTTCTTCATCCTCTTCCACAACCACAGATCCTTGTTTTCCTATCCCAACATTCCTCCCGGTTCCATCGGCCTTCCCATCCTCGGCGAGAGCCTCGAGTTCTTATCCACCGGCTGGAGAGGCCACCCTGAGAAGTTCATCTTCGACCGTTTGAATAAGTATAAGTCTGATGTCTTCAAAACCTCCATCGTCGGCGTTCCGGCCGCCATTTTCTGTGGCCCTGCCTGCAACAAGTTCCTCTTCTCTAACGAGAATAAACTCGTTACTCCTTGGTGGCCGGACTCCGTCAACAAGATCTTCCCCTCTTCTACTCAGACTAGCTCCAAAGAAGAAGCTAAGAAACTCAAGAAATTCCTCCCGCAGTTCCTTAAACCCGAAGCGCTTCAGCGTTATATTGGAATTATGGATGAACTTGCTCAACGCCATTTCGCTTCCTTTTGGGAGAACAGAGAAGAGGTTCATGTGTTTCCTCTCGCTAAAAGCTTCACATTCTCGCTGGCGTGCCGATTGTTCATGAGCATGGAGGATACAATCCACGTGGAGAGATTATCTGGACCATTTGAGCACATTGCAGCAGGAATCATATCGATGCCTATCGATCTACCAGGAACACCGTTCAATCGAGCAATAACGGCGTCGAAGTTCATCAGAAAGGAACTGGTGGCGATCGTGAGGCAGAGGAAAATGGATCTGGCAGAAGGAAAGGTGTCGGCGACGCAGGACATTCTGTCTCACATGCTTCTCACGTGCGATGAGAACGGATTGTACATGAACGAATCCGATATCGCCGATAAGATTCTGGGACTGTTGATTGGTGGCCATGACACTGCCAGTGTCGCATGCACCTTCATCGTTAAGTTTCTTGCTGAACTTCCTCATATCTACGACGGCGTCTACACAGAGCAAATGGAAATAGCAAAAGCAAAAGCCCCAGGGGAGACATTGAAGTGGGAAGACATTAAGAAGATGAAACATTCATGGAAAGTGGCCTGTGAGGTTCTAAGACTTGCTTCCCCACTCCAAGGTGCCTTTAGGGAAGCCTTAAACGACTTCGTTTTTAATGGCTTCTACATTCCCAAGGGCTGGAAGCTATACTGGAGTTCAAACTCAACACACAAAAATCCAGAGTATTTCCCAGAGCCCTATAAGTTTGAGCCAGCAAGATTTGAAGGGAATGGGCCATTGCCCTACACCTTTGTGCCCTTTGGGGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCAAAGCTTGAGATTTTGGTGTTCATTCATAATTTGGTCAAGAGATTCAAATGGACAAAGCTACTTGAAAAGGAGAATATCATTGTTGACCCAATGCCAATCCCTCAAAAAGGTCTCCCTGTTCGCCTTTTTCCTCATCAACCTCGCTCTCTTTAG | 1452 | 47.18 | MEHFLISLLILFLFFLSLTFFILFHNHRSLFSYPNIPPGSIGLPILGESLEFLSTGWRGHPEKFIFDRLNKYKSDVFKTSIVGVPAAIFCGPACNKFLFSNENKLVTPWWPDSVNKIFPSSTQTSSKEEAKKLKKFLPQFLKPEALQRYIGIMDELAQRHFASFWENREEVHVFPLAKSFTFSLACRLFMSMEDTIHVERLSGPFEHIAAGIISMPIDLPGTPFNRAITASKFIRKELVAIVRQRKMDLAEGKVSATQDILSHMLLTCDENGLYMNESDIADKILGLLIGGHDTASVACTFIVKFLAELPHIYDGVYTEQMEIAKAKAPGETLKWEDIKKMKHSWKVACEVLRLASPLQGAFREALNDFVFNGFYIPKGWKLYWSSNSTHKNPEYFPEPYKFEPARFEGNGPLPYTFVPFGGGPRMCPGKEYAKLEILVFIHNLVKRFKWTKLLEKENIIVDPMPIPQKGLPVRLFPHQPRSL | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9732088 | 9741186 | + | Lsi06G006510.1 | Lsi06g00651 | 665381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g00651 | 483 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi06g00651 | 483 | Gene3D | Cytochrome P450 | 27 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | SUPERFAMILY | Cytochrome P450 | 28 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PANTHER | CYTOCHROME P450 26 | 8 | 476 | - | - | |
Lsi06g00651 | 483 | Pfam | Cytochrome P450 | 37 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PANTHER | BETA-AMYRIN 28-OXIDASE-LIKE | 8 | 476 | - | - | |
Lsi06g00651 | 483 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g00651 | 483 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi04g01209 | Lsi-Chr4:18629166 | Lsi06g00651 | Lsi-Chr6:9732088 | 7.24E-117 | dispersed | |
Lsi04g01210 | Lsi-Chr4:18669643 | Lsi06g00651 | Lsi-Chr6:9732088 | 1.42E-92 | dispersed | |
Lsi06g00651 | Lsi-Chr6:9732088 | Lsi06g01257 | Lsi-Chr6:23155590 | 0 | dispersed | |
Lsi08g01473 | Lsi-Chr8:22849026 | Lsi06g00651 | Lsi-Chr6:9732088 | 9.78E-61 | dispersed | |
Lsi06g00651 | Lsi-Chr6:9732088 | Lsi04g01563 | Lsi-Chr4:23194296 | 6.22E-82 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g00651 | K20667 | - | csv:101206033 | 886.715 |