Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g01131 | ATGGCAGCCCTCCAAATCTATAGTACCGAAACCGAAATCTCTGCGGAGTTTTTGGTAGATCGAATCATCGACCTTTACGAAAGCATCTCGAAGCTCGAAAGCCTAAAGCCATGCAAGAAAGTGAACAACCTCTTCACCAACCTAGTAAACTTGTGCATTTTGCCTTGTTCAATTGATGTCTCAACATTGCCACCAAATTTACAAGCCATTCGTGAGAGGCTCATAGTTCTATGTGGCCAAGCTGAGGGCTTACTCGAGTTAGAATTCTCAACTTTGCTAAGCAAAATCCCAAAACCTCTCAACAATCTCACTCTATTTCCATATTATCAAAACTACATCAAATTAGCCAACCTTGAAAACAAGATTTTGAATGAAAATGGAGTTGTCAATCCAAAGAAGGTAGCTTTTGTTGGGTCAGGTCCTTTGCCTCTAACTTCAATTATTATGGCCATGCAACACATGAAGGGCACATATTTCGATAACTACGATGTAGACAACGTGGCAAATGACGTGGCGGGAAAGATCGTGGGGTCAGATGCTGAGGTGGAAGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAAAAGAAGAGCTTGGAGGATATGATTGTGTGTTTTTAGCGGCTCTTGTGGGAATGAAGAAGGAAGATAAAGTGAAGATTATAAGGCATTTAAGAAAGTATATGAAAGAAGGTGGGATTTTGGTAGTGAGAAGTGCTAAAGGAGGTAGAGCATTTTTATACCCTGTGGTTGAAGTTGGAGATTTGGTTGGCTTTGAGATTCTATCTATTTTTCATCCAACTGATGATGTTGTTAATTCGGTTATTTTAGCTCGCAAGACTATGATTATATGA | 858 | 39.98 | MAALQIYSTETEISAEFLVDRIIDLYESISKLESLKPCKKVNNLFTNLVNLCILPCSIDVSTLPPNLQAIRERLIVLCGQAEGLLELEFSTLLSKIPKPLNNLTLFPYYQNYIKLANLENKILNENGVVNPKKVAFVGSGPLPLTSIIMAMQHMKGTYFDNYDVDNVANDVAGKIVGSDAEVEGRMKFWTRDIVEVKEELGGYDCVFLAALVGMKKEDKVKIIRHLRKYMKEGGILVVRSAKGGRAFLYPVVEVGDLVGFEILSIFHPTDDVVNSVILARKTMII | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 21563174 | 21564031 | - | Lsi06G011310.1 | Lsi06g01131 | 665861 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g01131 | 285 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 10 | 285 | IPR004298 | GO:0030410|GO:0030418 | |
Lsi06g01131 | 285 | Gene3D | Vaccinia Virus protein VP39 | 13 | 283 | IPR029063 | - | |
Lsi06g01131 | 285 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 283 | IPR004298 | GO:0030410|GO:0030418 | |
Lsi06g01131 | 285 | PANTHER | NICOTIANAMINE SYNTHASE | 1 | 283 | - | - | |
Lsi06g01131 | 285 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 116 | 275 | IPR029063 | - | |
Lsi06g01131 | 285 | Pfam | Nicotianamine synthase protein | 15 | 283 | IPR004298 | GO:0030410|GO:0030418 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g01131 | Lsi-Chr6:21563174 | Lsi11g00633 | Lsi-Chr11:6689014 | 6.64E-98 | dispersed | |
Lsi06g01131 | Lsi-Chr6:21563174 | Lsi06g00055 | Lsi-Chr6:447411 | 4.52E-102 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g01131 | K05953 | - | csv:101209464 | 489.96 |