Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g01406 ATGCGGCTTCGTTTGATTCGTTTTTCCGCTCTTGTTTTGCGAGTTGGATTTGAGATGTATGGTCAAGCAAATTATGCTTCTCAGTTCGGGCAGGGTCCTCAGAAACCGTGGCCACCTGCTTACCAACAGCGTGCAGGAGCACCTCCTCCGCCTCCTCCTCCTACCTCATATGTTCAACCAGGCCCTCCAATCCCATCTCATCGTATAACTCAACAAGCACCTGTCCCCTCACCTCAGGCTACGCAACCTCTACATTTGTCTCAGCCAGGTTCCCATGGCCCACCACCTCCCTTCTGTCAGGGCCCATCCATTCAAGTGTTACCTGGTGGGATTACAAATATCCGTCAAACATACTTTCACACGTTTCCACCAGTCCATGGAAGCACACAAGTTTCTGTATTTAACTCAACTGCTCAGCAGAATGTGCAACTTTCACACTCGGGAGTTCAGAATATGCATCATGTTCTACCTCCGCCGCCGCCGCCACTACCACTGCCACCACCACCACCACCTCCACCTCCTCCTCAAGCTCCCAATCTAGATTTATTACGGCCTCCGCAGCCCTCTACCATAGGACCTCTTCATCCTCCTTCACAAGGGCAGGCGTTATATGGAGCTCAAATTCATTCACCATTGCAACAAGGTGGTTTGCAGGTCTTTCCCTCTATTCCACAACACCCAACAACATCCACTTTTCCTACTCCCTCATCCAATTTTCTTGGAGATTCTCATCTGCTTCCAATGGCTCCTCCTCCACCACCATCCTCTCCGCCACCTATTCCGCCTTCTCCCCCTCCTCCCACCTCACCCTCTTCTTCATTTCTATACCCAGATTCTTCCGACTCATTGTGTCGGTCTGAATTAGGTCCTGGTTCTACCATTCACTATAGTAAAGACTTGAAGCCCTCTGAAATTGATCAAGGAGGCGCACCTCCCAGTCATTTAGGGGATAATGGACCCAAGGATGATGAACATAGAAACTTAGAAGTTGGTAGTGGCCTTATGGTTCTTCCTCCATCTCCACCCAAGCCAAAAGATGATAGAATTGTCAAGAAGATAGAAGTATTATGTCAGCTCATTGCTAATAATGGTTCCAATTTTGAAGACACAACTCGCCACAAGGAATTTGGGAATCCAGAGTTTGAATTTTTATTTGGCGGTGAACCAGGAAGTGAATCTGCAATTGGCCACAAATATTTCCTGTGGATGAAGATGAAATATAGTTTGGCTTCCAAAAATATAGAAATGAAAGAAAAATCTCCATTGAGATCTTTAAGAATTGAGCCACAATCTGAGAATTTGACAGTGTCAGCAACATCCGTTTCACCTGCAAACTCTGACATGGAGATGGAAGGAGAGGAAACTAGTCACTCGTTTGAAATTCGAAGCTACGAGTGCAAATCAAGAAAAGAAGAGCATGATGCAAAGGATCAGGTACAATTGCAAGAACCTGAAGTCTTGAGAAGCTGCAGCCCCGAAAAGGAGAAGGTAGCCAAAGGGCCAAAACTTCTGCTCGACCATGAAAAATCTGTCAGCATTGCTGCTTGCCAAGTTCACAGCCCTATCAGAAGTACTGCTGGAGTTACTGAACTTCCTCCGGGAAACAATTTTGAGAATTCTCCTACCTGCTTGCAAAATGACAAAGGTCTAGCTGGTGAAGTAGCATCTGCGGCAGCCACTATTCCTAGTCAGTCTACTGCAATTATTACAGGTGGCAGTCCATTTAGACTTATACAGGACTATGCTTCCGATGAAAATTCAGAAAGTGATGAGGATTCACACAATAAAGATGTCCATTTTGTTGCTATCACACCTTCAACTCCAGCTTATTTTTCCAAGACTTCCGACAAAGACACTGACAATTTGACTATTCTTGGATCAAAAGGTTCTTGCCAGGTTCAATGGAGTTATGTTCCACCTTGTGAATCCTCCATGCCTGAATCTGGTGCTCAGTTCCTCTCAGAATCACCAAGACAGGTTTTTGATGCTAATAAGGCAAATGCTAGAAAGACAGGGAATGAACAGAGTTCCAACAACCAACAGAATCAAATTGGTACTAGCACCGGTTCTAAGTCTTTGGATGCAATGAATGGTCGTAGTGTTGATGTTCCCCAAGATAGTGACAAGTTACAAAAGGAAAATGATGCAGAAAAGGTGAAGTTGGGATCATCTCCCGTAAAAATAGATGAATTTGGGAGATTAGTCAGAGAAGGTGGCAGTGATAGTGATTCTGAGGATTCACACTATACAAGGAGACATAAGAATAAAAGATCTAGAAATAGTAGCGAAAGTCGTTCTCCTGTCGATAGGAGGAGGGGACGAAGGAGTCCACGGAGAAGAAGGGAGAGGCGAAGCCGTTCTCGCAGTTGGTCTCCTCATAACCAGAGAGGCAGAAGCAGGTCTCCTGTCCGCAGGCGTACAAGCCAGTTTAATAATGAGAATATGAGACGAGATAAGGGCATGATACGAAAATGTTTTGATTTTCAGAGAGGTAGGTGCTATAGAGGAGCATCTTGTCGCTATGTGCACCATGAACCCAACAAGAACGATGGATCAAGACTCCATAGGAGCAAACATCATGATGTTCACCCAACTTCCAAGAATATAAAGATAAGAGAGGACACTATGAACATGTCTAGGGAAGTATCAGATCTTGGGCATATTAAAGTTGAGAATCTGGAGAGCATCCCACTTAATGTGTCCTCAAAAGATGATACTCATGATTGGAAGACAGATAGTAATACTGGTGATCCAGATTCATTTATAACTAAATCTCAAAGTTTTATAGATAAATCTGGCTTAGTTCAAGAAGAATTAATTTATTCAAAACCAGCTGAGGCTGTCCACATTCATGTTAACAGTGATGGTCAAGAAGCAGAGAAGTCTTACGGGCAACGTTCAGTTACAGCCTCCTCACAATGCATGAGCAATGCTGACACAGAGAAATTCTCTGGTGATATTTCCACGAGCATTCTGACTTCTGTGGCTCAGCAATCAAGCATCTTTGTAACTGCAGTTACCACTAATAAAGCTCCTGAATGTGAACATCTTCCAGATAAAACATCATCCATTAAGCCACAGTTTGATACCAGTTCTGCTAGTCAGCTACCTTTGACCCCACAAATTGTATCGCAGTCTCCAGTACCTAAACCATCATCTGCTACTGCTTCAGTTTGTGCTATTGATGATGCTCATCCTCTTAGGGAGCTGCCTCCTCCGCCTCCTCTCATAATTTCACGTGTCTCTAGTGCTGAGGTCCCAATGCCTGCCCCCTATAATTTTGTGTCACAAAATGTGTGCTTTCCTTCTAAATCTTCACTACCAGGAGGTTTTCATCCTCATCAAGATTTGGTATCCATTCAACCATCTCACTATCACAGTACCTCTTTATTGCCTCCGAAACCATTGTATGATTCATGGACTCCTGTAACTACCAAAGATGGTATGCCAATGCAATTTCAACAGAGTCATTTGTCTCAAGGAAGTGATCTGGGTTCTCAGTCTGTTATGAATTCCCAGCCATTGGAGTTGCATTCTCATTCCAAGCTTGGTGAGTCCCCAGTCCAAGAGCCTTATAGAGCTCCTCCAATGCACATGGATGAAATTAGATCAATCGCCCCAGTTGCAAATAATCGACCTACTCAACCTTTTGGATTCCCAAGTTTTCAGAATGAAGAAAACTTTGGACGGACTTCGGTGGAGATGAATTCTTCCAGTTTTTTTCCTCACCGAAACTTTAATGATCATTCTGTGCCTGTTACAAATGCAAATAGAATGCAATCTTCTGCTGACAATTTTCCTCCTAGTGAATTTCGAAGTTCATTTTCACAGTTTCATCCTTATTCATGGTTTCAACAGCCATTGTATACCTCACAACCTGCACATGATAGCTTGTTCCGTGACCCAGGCCAGATTGGTAGTATGTCTCGACATTATCCCGATCCTCTAAGCAGGAACCATCCATTGCTTCCTGATTTTGGGGGTTTGGGAATTACCACTTATCATAATCCTTATGCTTCTACTTTTGAGAAGCCACTTAGCTCCAGCTTCAGATCTAACTTTTTGAACTTTGGAAATGATGCACCTAGTGGTGATATACGTAGTTCTACTTTCAATGTGAGCAATGTTCGCCTTGATGGGCAAGGTGCTAATTATGTTGGATCTAGGCAGACAACTGCTTCACCAAATTCCACAAAACCTTTGGGGAAACTCTTGTCCGGTACAGGTGGTGACCAGTATGATCCACTCTTTGACAGCATTGAGCCATCATCACCTATAACCAAGAAGTCCGATCGTGGTCAAAAGCTGAAAAAAGCAAGAGAATCTCATATGGTGACAAGACTTGGTGGTTCTCATAAATTACTAGATGTGGAGGAGAACAACAAGCATAAGGAAGTTGCTGCTGTGACTTCAACTACTTCCTTGGAGAATGATGAATTTGGAGAGACAGCAGATGCAGAAGCTGGTGCTGTTGAGAATGACCTCGATGACGAAGCAACCTTATCAGGAGAAATTGAAATTGATCAGGTTAAGTCCTCTGAGAAGGGCAAGAAATCCAAAGGTTCCAGGTCAATGAAGCTTTTCAGGATTGCTATTGCCGATTTTGTCAAGGAAGTTTTAAAACCATCATGGCGGCAAGGCAATATGAGCAAGGAAGCTTTTAAGACAATTGTCAAGAAGACTGTTGACAAGGTATCTGGAGCTATGAAGAGTCACCAAATACCCAAGTCTCAAGCAAAGATAAATCGATACATTGATTCATCACAACGAAAACTGACAAAGCTTGTTATGAAAAGAGTTCACACATGGCTTAATCAACTCGTCTCTAGAAGAGACATGTTTGGGACGAGTACTGTAAAAAAGACGAATCCTGACCACCTTCGGCCTCGTAAGCGTACACTATACGTGACTTTACCTTCTAAGATTGCAATTAGATTAGAGCAGGTGATGGAAATGGCTGTTTGCAATGCAAAAGTTAGTTTGGAAAAGAAAAGGAAAAGAAAGCAGAGAAGGAGGGGTAACACCACTAGAGGCGATAACAGAGGTTGCAATCCTGCTGAAGATAATGCTTCAACAGAAAATAATGTTTCTCAAGAATCCCCAAATGAAATGTGCTTGAACATGGAGCCTGAAATGGGGCAATCTCATTTAGAAGTAAATCTGCTAGGAGAAAAGAATGAGGAGAAGCACGATGATTTACAGTGTGGAGAATCTACTGGAACATCTGTCTTGACCCTCTTGAACGTTGAAGTTCTTAAAGAAGATGATGAGACATCTACTTCCCCAAATGTAGACTTTTGTTCGGCAAATGGAAAGGAAAATTCTTCAGTTCCTGAGGATCCAGATGGGAAAGGTACTGATATGGTTAAAAGAGATGATGAACATGTAGAAACCGTAGATCATTCAACTCCTTCAAGCCATGTTGAATCCCAAAGGATTAGGAAAAGAAGGCGGCGGCGTAGAAAGGGAAGGTCGTTAGAATCCCCCCAAAAAAGTTTGGAAACCAATATGGAGGATGAAAGGAAAATTTCTCTATTGAACCATCCTCATGAAGAGGAGACCAATAACCACCTTAAAAATTTTGTAATAAAAGAGGTTATGAATGGTGTTCCGTTGGAAGAATCAGTTGACTGCCCAACGAGTGAAAAACCTGAGTTGTTGTCTACAAATACAAAGGAAAGCTCTATTGTTATTGCAGATTCTCAGAAGTCCAAGGATTTTGAAAATGCTACCATGGTAAAAAAAGATGATGACTGCTTAGAGACTAAGTATTGCTTGGCTCAATCAAACAGTGATGGTACCCATGGCAAAACAAATAGGGAGAGAAAAAAAGGTCGAAGAAGGAGAAAGTTTGCAGATTTCTTTGAAGAAAGTTTGAATACTGATGTGGAAGACATTAAGAAAGATACTGCATTCAACTCTTTAAATGAAGAGGGTGCAACTAGTTTGCATGAGCATTCTACCACCACCAAGATAGTAAAAGATGTTTTGGTGGAAGAAGTGTCAGTCAACTGCTCTGTGGGTGTACGTACATCAGATGTGAAGGAGAGAGAGGAAACCATAAAGAAAAATGTACGTCATTTGTTGGCTTGTGATGCAGCAAATGATAACACCAGTACAACTGGTTTGTCAAAAAAAAAGCTTCTCATACTTGATGTAAATGGACTGCTCGTTGATTTTGTTCCATATTTTCCAGATGGATACACTCCAGACTTTTGTTTAAGAGGCCCTTCTGTGACGACTTTCTACAGTTTTGTTTTGAGAGATTTGAAGTGGGGATATGGTCATCGAGAACCTGTTGTCCTTCTTTCTGGTAAATATGAAGAACCTGAACATGATCAATCGCACTGTACAACTACAAGGTTCACCACTATCGAGAACGATAGGAAGCCCCTTGTTTTGAAGGAATTGAAAAAAATATGGGAAAATTTGGAACCGAATCTTCCATGGAAAAAGGGGGAGTTCGATGCGTCAAATACTTTATTGTTGGATGATTCCCCATACAAAGCCTTGCGCAATCCAGCTAATACTGCAGTATTTCCCACTTCATATCGGTACAAGGACAGTGATGATACATCACTAGGACCTGGTGGTGATCTTCGCACTTATTTGGAGGGTGTATTTACTGCAGAAAATGTTCAAAAATATGTTGAACAGAATCCATTTGGTCAAAAACCCATATCTGAATCTAGTCCATCTTGGAAATTCTACCATTACGAGCACACAGAGAGTTTTTACTCGTTAGAAATACACACAGCTAGAAATCCAGCGTTTCAGTTGAGGCCCATTTTGGTCCCCTTTCTCATGGCTGGGGCCCAAATGACAGCTCAGTATTCTGATATTGGGAGTATTCTATGCCAAACCCAATTGAGAATAGAAGATATGGCTGCAAAACTTCTACATTCCTTGGCAGATGACAATCCTGATTTGCGCAAGCAAATAGGATGTATGACTGGGATTTTTCATCTATTTGATCGTCATAATGCGATCACCACAAAGCGAATTAGTCACAAGAGGCTCCCTCCTGGTCATTTCCAATCAAATGGTGGTGAATTGGTGAGTACTGCACATCACCAAGAGAAAGCAAATGAGTCAAGTCTGAATGAGAATGTGAATGACAAACAAAGCATGCCTGCAGAATCATCCAGAGACTCTCTCTCCTCCTGTTCATCATCTTTGTCCTCTCTGGAGTGCAATAAAACTGCACAACTAGAAGCCTTGTCCTTTTCCAGGACCAATATTCTTGAAAGTCCCTCAATGGGGTTGGCATTGGACCGGTTGAATACCTCTAGCTATTCAGAGACACAACCATTCAATATCAAACATGTAGTAAAAGATTCTATGCATAGAGAAGTAAGAACATCATTTGTTAAAATGACAGACATTGATGACTTTGGTCATGGTGTAAAACATAGAGACTCTCCAAGACCCCCTCCAATGTCCAAATGTGCAGAAATTTCTTCAAGGGTTGCAAGAAATCATAAACAAGATGTTCCGATTGATATCGAGGAGTCTTTTAGAGTTCTTGCTAAACTAAAAGATGCATCCTGGAACTTCAGTGAAGCTAAAGCACGTCCAAGATCATCATGTGAAAATGAAGCAACACATGGAAAGAATTTACTTTCGAGGGATTTGCCGCGGCTTTCTTATGATGGTAGAGAGAGAAGTCAATTCTCCTCTGAATCAAGAAACCTCAAGTCCAGCCCTAAACTGAAAGAGCTCCCTAAACTCTCACTGGACAGCAGAGAGACTTCGACATGTAGAAATTTTCGAAATAGTAGCTGCTCTACTGACAAATCTCCCGAGCTACATCATTCATCAGGCAATCAAAAGCGGCTTCCCAGTGTTGTAGCAAAATTGATGGGTCTAGAAACATTGCCTGATGCGTTTTCGTCTACAGATACTCAATGTGGTGGTGAAACATTTGCAAAATCATTAGGATCTAGAAATCTGAAAATATATGCCTCTGATAAAAGCTCATCTAAATGCTCAACTTCACCACGGCGAAAGAATCATGATTTGATTAGAAAACCTATTCAAACTTCTAGGCTCCCTGTTGAAACAGCACCTTGGGGAAAGCTAGATGGAACTCAAGTCACTAAAAGCACAGCTCTTAGAACTGTAAAAGGTCCACCACCGAGCTCCTCCCCCGCTGTTTATGGTGAAGTTGAGATGAGGCTGAAAGATCTTGAATTTGAACAATCCAGTAAGGATCTCAGAGCACTTAAAAAAATACTTGAGGCAATTCAAATTAGGGCACTATCCGAAATCGGAATCGAAGAGCAAACTTCAGTTTTTGGAATTCAAAGGAACCAAGCACCAAGTTCTTCTAGTCCCAATCAAAAGACTAGGTTGATGAGCCAACGAAACAGACGGAGCAGTGTAGTTGTTGCCTCCTCCACTTCTAATGTACCTAATTCTTCAAAGGCATATGAATCTCCAATTATCATTATGAGACCTGCTAAACCTGTTGAAAAATCAGCTATATCAACATCAATGATTCAAATGGATCGCTTCCCTGTTCTCCATAAGCTCCAAAATGAAGGATTTCAGGATAATAAAAAAGGGTCTAGCAATGGCCAAACCAGAGCACACTTTCGTAGAAGCACACAAAAGGATCTTGCTGTCATTACCTCTGAGAAGAAGTCGGTTTCTAGAAGTATAAGATCGCCTCAAACTTCTTCAAAACCTCAACTTGTACTTACGGAAAGCAATACGAGCTCAATAAAAAGTTCAGATTCCGTTAGTCCAAGACTGAGACATAGGAAGGTTGAGGTGGAGAAACGATCGCATCCCCCTAAATCTGATGCAAACAAACCCAAAAGGAAAATGAAGCAGACAGATTCAAGTTCCCACTGTGGAAAGATAAAACCCAAGTCTTCCAATATAAGACAATGTGATGATCAATCAAGTGAGATGAGCAATGAACCAAGAGTTTTGAGTTACCAAAGTGATGACATGACCCAACAATCAGATACTAGTTTATCCTTGGATTCAAAGATAGATATTGAGGTGAGCAGCAGCATGCAATCAACCGAGATCGATGACAGCCAGAGACAAGCCATGGAGGCTGCTGAATTCTTAAAACCTGGCTCAGTTAAAAAGTTATCAATGGTGGCTAGTAGTCAAGATGGGTCGATGGTAGAACGAGATGCAACAGCACTAGAGCATCCGAGTCCTGTCTCTGTCCTTGATGCCTCATTATATAGAGACGATGAAGCATCTCCTGTGAAAAAAATTACAATTTCACTTCATGGTGATGATTCGCTAGATTCTAATGCGAGGCGTAGTGAAGACCAATGCAACATTTCAGATGACATCTTTGTAAATCCTTTAGTTTTAAATCATAATGTGGAGATTGACAGTATGAAATTTGAAAATATTGAGGATCTGATTCAGAAGCTTGGACGTTTGAACTTGCATCATGATGAAGGAGTGAAAGATTATATTGGATTGTTGTGTGAGAATACCAATCCAGATCACAGATACATCTCGGAGATACTGTTAGCTTCCGGTCTTCTACTCCGAGATCTTGGCTCTGGCCTGACCACATTTCAGCTTCATCCTTCTGGTAGTCCCATCGACCCGGAGTTATTCTTCGTTTTGGAGAAAACAAAGGTGGGTGGCCTACCATCAAAAGATGGGTTTAGCCCTGCAAGAGCTTCCTATTCAAACAGGGAGAAATTTGATAGGAAGCTCATATTTGATGCTGTTAATGAGATACTTATTGAAAAATTAGCTCTCATTGATGGTGGTGCTCCTGAGCCATGGTTGAAGCCAACAAAGATTGCAAAAGAAGCTTTTAGTGGGCAAAAGATTTTGAAGCAATTGTGCAATGAAATAGAACAGTTTCAAGCTAAGAAGTTCAGATGCAACTTCGACGGAGAGAAGGATGACTCAATGAGCATTCTGCAAGACGATGTGATGCACCAATCGAGGAGTTGGACAGATTTTCGTGGTGATATCTATGATGTCATGTTAGACGTCGAGCGATCGATATTCAAAGACTTGACAAAACAAATGGAGAAGCTTCTGTGGAAAAAGGAGATCCCCTGCAACAAATATGGGCTAGATGTGTAA 10080 41.89 MRLRLIRFSALVLRVGFEMYGQANYASQFGQGPQKPWPPAYQQRAGAPPPPPPPTSYVQPGPPIPSHRITQQAPVPSPQATQPLHLSQPGSHGPPPPFCQGPSIQVLPGGITNIRQTYFHTFPPVHGSTQVSVFNSTAQQNVQLSHSGVQNMHHVLPPPPPPLPLPPPPPPPPPPQAPNLDLLRPPQPSTIGPLHPPSQGQALYGAQIHSPLQQGGLQVFPSIPQHPTTSTFPTPSSNFLGDSHLLPMAPPPPPSSPPPIPPSPPPPTSPSSSFLYPDSSDSLCRSELGPGSTIHYSKDLKPSEIDQGGAPPSHLGDNGPKDDEHRNLEVGSGLMVLPPSPPKPKDDRIVKKIEVLCQLIANNGSNFEDTTRHKEFGNPEFEFLFGGEPGSESAIGHKYFLWMKMKYSLASKNIEMKEKSPLRSLRIEPQSENLTVSATSVSPANSDMEMEGEETSHSFEIRSYECKSRKEEHDAKDQVQLQEPEVLRSCSPEKEKVAKGPKLLLDHEKSVSIAACQVHSPIRSTAGVTELPPGNNFENSPTCLQNDKGLAGEVASAAATIPSQSTAIITGGSPFRLIQDYASDENSESDEDSHNKDVHFVAITPSTPAYFSKTSDKDTDNLTILGSKGSCQVQWSYVPPCESSMPESGAQFLSESPRQVFDANKANARKTGNEQSSNNQQNQIGTSTGSKSLDAMNGRSVDVPQDSDKLQKENDAEKVKLGSSPVKIDEFGRLVREGGSDSDSEDSHYTRRHKNKRSRNSSESRSPVDRRRGRRSPRRRRERRSRSRSWSPHNQRGRSRSPVRRRTSQFNNENMRRDKGMIRKCFDFQRGRCYRGASCRYVHHEPNKNDGSRLHRSKHHDVHPTSKNIKIREDTMNMSREVSDLGHIKVENLESIPLNVSSKDDTHDWKTDSNTGDPDSFITKSQSFIDKSGLVQEELIYSKPAEAVHIHVNSDGQEAEKSYGQRSVTASSQCMSNADTEKFSGDISTSILTSVAQQSSIFVTAVTTNKAPECEHLPDKTSSIKPQFDTSSASQLPLTPQIVSQSPVPKPSSATASVCAIDDAHPLRELPPPPPLIISRVSSAEVPMPAPYNFVSQNVCFPSKSSLPGGFHPHQDLVSIQPSHYHSTSLLPPKPLYDSWTPVTTKDGMPMQFQQSHLSQGSDLGSQSVMNSQPLELHSHSKLGESPVQEPYRAPPMHMDEIRSIAPVANNRPTQPFGFPSFQNEENFGRTSVEMNSSSFFPHRNFNDHSVPVTNANRMQSSADNFPPSEFRSSFSQFHPYSWFQQPLYTSQPAHDSLFRDPGQIGSMSRHYPDPLSRNHPLLPDFGGLGITTYHNPYASTFEKPLSSSFRSNFLNFGNDAPSGDIRSSTFNVSNVRLDGQGANYVGSRQTTASPNSTKPLGKLLSGTGGDQYDPLFDSIEPSSPITKKSDRGQKLKKARESHMVTRLGGSHKLLDVEENNKHKEVAAVTSTTSLENDEFGETADAEAGAVENDLDDEATLSGEIEIDQVKSSEKGKKSKGSRSMKLFRIAIADFVKEVLKPSWRQGNMSKEAFKTIVKKTVDKVSGAMKSHQIPKSQAKINRYIDSSQRKLTKLVMKRVHTWLNQLVSRRDMFGTSTVKKTNPDHLRPRKRTLYVTLPSKIAIRLEQVMEMAVCNAKVSLEKKRKRKQRRRGNTTRGDNRGCNPAEDNASTENNVSQESPNEMCLNMEPEMGQSHLEVNLLGEKNEEKHDDLQCGESTGTSVLTLLNVEVLKEDDETSTSPNVDFCSANGKENSSVPEDPDGKGTDMVKRDDEHVETVDHSTPSSHVESQRIRKRRRRRRKGRSLESPQKSLETNMEDERKISLLNHPHEEETNNHLKNFVIKEVMNGVPLEESVDCPTSEKPELLSTNTKESSIVIADSQKSKDFENATMVKKDDDCLETKYCLAQSNSDGTHGKTNRERKKGRRRRKFADFFEESLNTDVEDIKKDTAFNSLNEEGATSLHEHSTTTKIVKDVLVEEVSVNCSVGVRTSDVKEREETIKKNVRHLLACDAANDNTSTTGLSKKKLLILDVNGLLVDFVPYFPDGYTPDFCLRGPSVTTFYSFVLRDLKWGYGHREPVVLLSGKYEEPEHDQSHCTTTRFTTIENDRKPLVLKELKKIWENLEPNLPWKKGEFDASNTLLLDDSPYKALRNPANTAVFPTSYRYKDSDDTSLGPGGDLRTYLEGVFTAENVQKYVEQNPFGQKPISESSPSWKFYHYEHTESFYSLEIHTARNPAFQLRPILVPFLMAGAQMTAQYSDIGSILCQTQLRIEDMAAKLLHSLADDNPDLRKQIGCMTGIFHLFDRHNAITTKRISHKRLPPGHFQSNGGELVSTAHHQEKANESSLNENVNDKQSMPAESSRDSLSSCSSSLSSLECNKTAQLEALSFSRTNILESPSMGLALDRLNTSSYSETQPFNIKHVVKDSMHREVRTSFVKMTDIDDFGHGVKHRDSPRPPPMSKCAEISSRVARNHKQDVPIDIEESFRVLAKLKDASWNFSEAKARPRSSCENEATHGKNLLSRDLPRLSYDGRERSQFSSESRNLKSSPKLKELPKLSLDSRETSTCRNFRNSSCSTDKSPELHHSSGNQKRLPSVVAKLMGLETLPDAFSSTDTQCGGETFAKSLGSRNLKIYASDKSSSKCSTSPRRKNHDLIRKPIQTSRLPVETAPWGKLDGTQVTKSTALRTVKGPPPSSSPAVYGEVEMRLKDLEFEQSSKDLRALKKILEAIQIRALSEIGIEEQTSVFGIQRNQAPSSSSPNQKTRLMSQRNRRSSVVVASSTSNVPNSSKAYESPIIIMRPAKPVEKSAISTSMIQMDRFPVLHKLQNEGFQDNKKGSSNGQTRAHFRRSTQKDLAVITSEKKSVSRSIRSPQTSSKPQLVLTESNTSSIKSSDSVSPRLRHRKVEVEKRSHPPKSDANKPKRKMKQTDSSSHCGKIKPKSSNIRQCDDQSSEMSNEPRVLSYQSDDMTQQSDTSLSLDSKIDIEVSSSMQSTEIDDSQRQAMEAAEFLKPGSVKKLSMVASSQDGSMVERDATALEHPSPVSVLDASLYRDDEASPVKKITISLHGDDSLDSNARRSEDQCNISDDIFVNPLVLNHNVEIDSMKFENIEDLIQKLGRLNLHHDEGVKDYIGLLCENTNPDHRYISEILLASGLLLRDLGSGLTTFQLHPSGSPIDPELFFVLEKTKVGGLPSKDGFSPARASYSNREKFDRKLIFDAVNEILIEKLALIDGGAPEPWLKPTKIAKEAFSGQKILKQLCNEIEQFQAKKFRCNFDGEKDDSMSILQDDVMHQSRSWTDFRGDIYDVMLDVERSIFKDLTKQMEKLLWKKEIPCNKYGLDV 3359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24610754 24637188 + Lsi06G014060.1 Lsi06g01406 666136

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g01406 3359 ProSiteProfiles SURP motif repeat profile. 352 400 IPR000061 GO:0003723|GO:0006396
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2526 2540 - -
Lsi06g01406 3359 SUPERFAMILY Surp module (SWAP domain) 337 407 IPR035967 GO:0003723|GO:0006396
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 434 458 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 150 202 - -
Lsi06g01406 3359 SUPERFAMILY HAD-like 2044 2216 IPR036412 -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 70 88 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 246 272 - -
Lsi06g01406 3359 Gene3D Surp module 339 412 IPR035967 GO:0003723|GO:0006396
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2523 2611 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 154 182 - -
Lsi06g01406 3359 Pfam DUF761-associated sequence motif 2607 2629 IPR032795 -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2915 2952 - -
Lsi06g01406 3359 Pfam Domain of unknown function (DUF4378) 3160 3337 IPR025486 -
Lsi06g01406 3359 Pfam Surp module 353 403 IPR000061 GO:0003723|GO:0006396
Lsi06g01406 3359 PANTHER EXPRESSED PROTEIN 19 1597 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1928 1947 - -
Lsi06g01406 3359 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 19 1597 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 668 695 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1678 1700 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2872 2914 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 217 327 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 42 61 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1428 1443 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1387 1443 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1777 1810 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2547 2579 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1387 1403 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1811 1825 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 705 751 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1662 1700 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1754 1839 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2580 2611 - -
Lsi06g01406 3359 Gene3D - 2004 2223 IPR023214 -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 668 816 - -
Lsi06g01406 3359 Pfam NLI interacting factor-like phosphatase 2113 2212 IPR004274 -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2768 2808 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2848 2996 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2851 2865 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 1761 1775 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 771 803 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 217 241 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2356 2386 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 2953 2996 - -
Lsi06g01406 3359 MobiDBLite consensus disorder prediction 29 99 - -
Lsi06g01406 3359 ProSiteProfiles Zinc finger C3H1-type profile. 824 846 IPR000571 GO:0046872
Lsi06g01406 3359 ProSiteProfiles FCP1 homology domain profile. 2042 2207 IPR004274 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g01406 - - - csv:101219633 2411.34
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Lsi02g00127 Lsi06g01406 CCT
Lsi02g00127 Lsi06g01406 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00127 Lsi-Chr2:1036148 Lsi06g01406 Lsi-Chr6:24610754 1.13E-65 dispersed
Lsi03g00175 Lsi-Chr3:2305734 Lsi06g01406 Lsi-Chr6:24610754 2.20E-98 dispersed
Lsi05g00967 Lsi-Chr5:16871057 Lsi06g01406 Lsi-Chr6:24610754 4.47E-06 dispersed
Lsi01g00299 Lsi-Chr1:2668290 Lsi06g01406 Lsi-Chr6:24610754 2.51E-16 transposed
Lsi01g01143 Lsi-Chr1:9608195 Lsi06g01406 Lsi-Chr6:24610754 5.21E-18 transposed
Lsi02g00125 Lsi-Chr2:1022113 Lsi06g01406 Lsi-Chr6:24610754 0 wgd
Lsi06g01406 Lsi-Chr6:24610754 Lsi07g00941 Lsi-Chr7:11670163 1.60E-34 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g458 . . . . . . . . . . Cma10g00292 Cma11g00214 . Car11g00193 Sed08g0286 Cpe20g00082 Cpe04g01454 Bhi02g00089 Tan09g2033 Cmetu02g0987 . . . . . . . . . . . . . . . Lsi02g00127 Csa01g00609 Chy12g01491 Cme12g01931 . . . . . Bpe15g00572 . . . . Cmo11g00216 . . Car13g00903 . . Cpe18g00711 Bhi08g01074 . . Lac10g0174 Hepe07g2454 . . . . . . . . . Lsi06g01406 Csa01g00303 Chy02g02435 Cme02g01822
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009616 1 1 0 0 1 1 2 1 1 1 1 1 2 2 1 2 1 0 2 1 1 1 1 1 1 1 1 1 2 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi06g01406 Lsi_Chr06 FPKM 0.0 0.0 0.851759 0.797343 0.0 0.0 0.160336 1.769327 1.78309 1.766963