Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi06g01421 | ATGGACGAAATTTCTCTCATCGTCGCCGCCGTTGTAGTAACCTTGGCCTACGCCATCCTCCTCCACCGCGCTTTCTTCCTCCGCCGCAGATTCTGCCTCCCGCCTGGTCCAAAACCATGGCCGATCGTAGGAAACATGCCGCAAATCGGCGGAGCGCCTCTCCACTCCCTCCTCGCCGCCATGGCCGGCGAGTACGGACCTCTGATGTACCTCCGATTAGGATCCGTTGACGTGGTCGTGGCGGCGTCGGCGTCGGTGGCGGAGCAACTCTTGAAGATTCACGGCACTAATTTCCTTAGCCGGCCGCCGAACGCCGGCGCAAAATATATTGCGTATAATAATCGGGATATGGTTTTTGCACCGTACGGTCCACGGTGGCGATTACTCCGGAAGATCAGCACCGTCCATCTGTTCTCCTCAAAAGCCCTAGATGATCATCGCCGCATACGGGAGGAGGAGATAGGGGTGCTGGTACAGGCTCTTGCAAGGTCCGGCGAAGCTCCGGCGACCTTGGGGAGCTTGCTCACCGTGTGCACTGCGAATGTGCTTGGACGGACAATGATCAGCCGACGTGTTTTCGGTGATGGTAGCGGCGGCGATCCAGAGGCAAACATATTTAAGGCAATGGTGGAGCAAGTGATGGTGCTGCCCGGAAAGTTCAACCCCGGTGACTTTTTCCCGTCGCTTGAGTGGCTTGATTTGCTGGGTGTGGCAAGTGAGATGAAGAAGGTCCACAAATGGTTCGATGATTTTTTGACCAAGATCGTGGAGGAGCACCGGAATTTATTGGCCGGAGGCGGCGACCGAGGCGGCGACCAAGACTTACTGAGTACTCTTCTGTCATCGAAGGATGAAGCTGAAGATGAGAATGAGAAGCTTAATGACAGTGAGATCAAGGCTTTGTTGTTGAACATGTTTACAGCTGGAACCGACACGTCAGCTAGCACAGTGGAATGGGCCTTGACAGAGCTCATCAGACATCCCAAAATAATGGCCGAGGCCCAGAAAGAATTGGACACCGTAGTGGGCCGTGATCGCGCAGTTTCCGATCTGGACTTGTCGCAACTGCCCTATCTCCAGGCGGTGGTGAAGGAAACATTCCGGCTCCATCCACCGACGCCGCTCTCCGTCCCTCGCATGGCCGCCGAGAGCTGCGAAATCAACGGCTACCACATCCCCAAAGGCTCCACTCTCTTGGTCGACATATGGGCCATTAGTCGTGACCCAAAAGAATGGGCCGACCCACTCGAGTTCAGGCCCAATAGGTTCCTCCCAGGCGGCGAGAAGGCCCACGTGGATGTGAAGGGAAATGATTTTGAGGTGATTCCGTTTGGGGCTGGGCGGAGGATCTGCGTGGGTATGAGTATGGGCCTGATGATGGTCCAGATGTTAACTGCCACGCTGGCCCATTCTTTTGATTGGGCCTTGCCTAATGGGCTTTTGCCTGATAAGTTGAACATGGACGAGGCCTATGGGCTGACTCTGCGTCGGGCCCAACCCTTGGTTGTGCATCCACGGCCCAGATTATTGCCTGGGTACTTTCCGGCCGGCGGCAACTCATCGCCGGCGTCTTCCGCCTTCCGAGTTTTG | 1590 | 56.04 | MDEISLIVAAVVVTLAYAILLHRAFFLRRRFCLPPGPKPWPIVGNMPQIGGAPLHSLLAAMAGEYGPLMYLRLGSVDVVVAASASVAEQLLKIHGTNFLSRPPNAGAKYIAYNNRDMVFAPYGPRWRLLRKISTVHLFSSKALDDHRRIREEEIGVLVQALARSGEAPATLGSLLTVCTANVLGRTMISRRVFGDGSGGDPEANIFKAMVEQVMVLPGKFNPGDFFPSLEWLDLLGVASEMKKVHKWFDDFLTKIVEEHRNLLAGGGDRGGDQDLLSTLLSSKDEAEDENEKLNDSEIKALLLNMFTAGTDTSASTVEWALTELIRHPKIMAEAQKELDTVVGRDRAVSDLDLSQLPYLQAVVKETFRLHPPTPLSVPRMAAESCEINGYHIPKGSTLLVDIWAISRDPKEWADPLEFRPNRFLPGGEKAHVDVKGNDFEVIPFGAGRRICVGMSMGLMMVQMLTATLAHSFDWALPNGLLPDKLNMDEAYGLTLRRAQPLVVHPRPRLLPGYFPAGGNSSPASSAFRVL | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 24754847 | 24760856 | - | Lsi06G014210.1 | Lsi06g01421 | 666151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi06g01421 | 530 | Pfam | Cytochrome P450 | 34 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi06g01421 | 530 | PANTHER | CYTOCHROME P450 71B11-RELATED | 7 | 508 | - | - | |
Lsi06g01421 | 530 | Coils | Coil | 276 | 299 | - | - | |
Lsi06g01421 | 530 | Gene3D | Cytochrome P450 | 28 | 509 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | SUPERFAMILY | Cytochrome P450 | 34 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PANTHER | FLAVONOID 3'-MONOOXYGENASE CYP75B4 | 7 | 508 | - | - | |
Lsi06g01421 | 530 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi06g01421 | 530 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi06g01421 | Lsi-Chr6:24754847 | Lsi01g00721 | Lsi-Chr1:5720652 | 7.68E-136 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi06g01421 | K05280 | - | csv:101207160 | 850.892 |