Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g01540 ATGCTGTCAAGTTCTTGCTTGAGTTTGTTAGAGTTATCATCCACGGATATGTTGGATTTTCCTCATACACCGAGAACGGTTCCACGGGTGATGACTGCTTCAGGAATATTTTCGGATAAGGACAAAGATTCGGAAGTTTCATCCTCTAAATGCAGAGGGAGAAAAATTATAGTGGCAAATTTTCTCCCTCTTCATGCTAAAAAGGATCCAGATTCTGGAAAATGGAACTTCAGTTTTGATGAGGATTCGATTCTGCTTCAGCTGAAGGATGGCTTCTCACCTGATGTAGATGTTATATATGTTGGATCGTTAAAGGTCGATGTCGATGTCCGAGAGCAAGATGAGGTTTCTCAGAAACTGCTGGAGGAATTCAACTGCGCACCGACTTTCATTCCTGCAAACCTTCAGAAACAGTTCTATCATGGATTCTGCAAGCAACATTTGTGGCCACTTTTTCATTACATGATGCCAATTTCCCCTTATCATGGATCTCGCTTTGATCGACATCTTTGGCAAGCGTATCTTTCAGTCAACAAAAGGTTTGCAGATAAAGTGATGGAGGTAATCAATCTGGAAGAAGATTATGTCTGGATTCATGATTACCACCTTATGGTTCTCCCTACTTTCTTGAGAAAACGCTACAGTCGAATTAAGCTCGGATTTTTCCTTCATAGTCTGTTTCCCTCCTCAGAAATCTATCGAACTCTCCCTGTTAGAGATGAGATTCTGAGAGCATTACTTAACGCAGACCTAATTGGTTTCCATACATTTGATTATGCTCGACACTTCCTATCTTGTTGTAGTAGACTGCTTGGTCTGGAGTATGAATCTAAACGCGGATATCTCACGCTCGAGTATTTTGGCCGTACAATATACATCAAGATTTTGCCTGTTGGAGTTCATATGGGTCGACTTGAATCTGCATTAAATCAACCGCACACTTCAATGAAGGTCAAGGAAATCAAAGAAAATCTCAAAGGAAAGAGACTTATACTTGGTGTTGATGACATGGACATATTTAAAGGTATTGGTCTGAAGTTATTAGCTATGGAACAGCTATTGAAACAGCATCCAGAGTTGAGAGGCAATGTCGTTCTTGTGCAAATTCTAAATCCGGCACGGAGCAATGGGAATGACGTCCAGGAAGCAAAACGGGAAACTTATGAGATAACCAAAAGGATTAACAAGGTTTTCGGTTGTCCGGGATATGAACCTGTAATCTTGATTGATCATGCTATTCCTCCTCACGAGAAGATTGCATATTATGTATTAGCAGAGTGCTGCATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCGTATGAGTACATTGTTTGTCGACAGGGAACTTCAAAAATGGATGAACTCTTGGAAGTCTCTCCGGATTCACCTCGTACCAGCACGATTGTCGTGTCGGAATTTATAGGCTGTTCACCATCTCTAAGTGGTGCAGTCAGGGTAAACCCCTGGGATTTTGATGCTGTAGCTGATGCACTTTATGCAGCTGTCACCATGCCTGCTTTAGAGAAGCAACTGAGGCACGAAAAGCATTACCGGTATGTTAGCTCTCACGATGTTGCTTACTGGGCTCGCAGTTTCTCGCAAGATTTGGAGCGAGCATGCCGAGAACACTACAGTAAACGTTGCTGGGGCATTGGTTTTGGTTTAGGTTTCAGAATTTTGTCACTTTCTCCAAGTTTCAGGAAGCTTTCCATCGAACACATTGGCTCTGCATATAGGAGCGCCTCTAGGAGGGCAATATTTTTGGATTACGACGGGACTGTGGTTTCCGAAACTTCGTTGGTTAAATCCCCATCGCCTGAAGTCATTTCTATCATCAACAACCTTTGCATGGATTCAAAGAACACCGTGTTTATAGTTAGTGGCAGGGGGAAAGATTCTCTTGGTTCATGGTTCGATTCGTGTAAGAATCTAGGTATTGCCGCTGAACATGGATACTACTTGAGGTGGAATAGGGACTCTGATTGGGAAGTTAGTCCATTAGCTGAAAACTTTTGTTGGAAAAGGATTGCAGAACCTGTGATGAAATTATATACTGAGGCAACCGATGGCTCATACATAGAGACCAAGGACAGTGCGTTGGTATGGCACCATCAAGATGCTGACCCTTATTTCGGTTCATGTCAGGCCATGGAGCTTTTGGACCACCTTGAAAATGTCCTTGCCAATGAACCCGTAGTTGTTAAAAGAGGTCAGCAGATCGTCGAAGTTAAACCACAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGATCAACTCTAATAAAGCACCCGACTTTGTGTTGTGCATTGGAGATGATCGATCCGACGAAGATATGTTCGAGAGCATATCAAGCAGAAGCTATAGTTCATCCCTTGCTAGCCCCCCAAAGATATTTGCCTGTACTGTGGGGCAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCACCGACGTTTTGACCTTGCTTCAAAGCCTGGCCACCCCTTCTACCCGTAAACTGAGGCCGAGTTTTGAAACTCGTGTTTTGTTCGAGGATGATGAAGATAATTGCTTGGATAGAGTAAGTTGGTTTGGTGGTGTAAATAACTCCTTTCACGACACTCGTTCTTCGCTTCTCCCGGATTCGAGAGTAGCCGAACAAGATCCATTGGAACCTAGGAATGCGAATCATGGGTCCCACCTTTATCCTGTGTCCGAAGCAGCGGATTATAATCCCCGCTTCCCTCCAAACAACAGCTCGAACGTCTTACCTGACTCTCTTCCTTGCGAAGCCGATAAATCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCTTGCTTTGGATCTCGCCGTGTGGCCACAGTCGGACCGTCGTGGTGGGAACGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGAGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGAGCTGGTCTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGACGACGATATCGATGATTTCAATGGTTTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA 3252 44.59 MLSSSCLSLLELSSTDMLDFPHTPRTVPRVMTASGIFSDKDKDSEVSSSKCRGRKIIVANFLPLHAKKDPDSGKWNFSFDEDSILLQLKDGFSPDVDVIYVGSLKVDVDVREQDEVSQKLLEEFNCAPTFIPANLQKQFYHGFCKQHLWPLFHYMMPISPYHGSRFDRHLWQAYLSVNKRFADKVMEVINLEEDYVWIHDYHLMVLPTFLRKRYSRIKLGFFLHSLFPSSEIYRTLPVRDEILRALLNADLIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHMGRLESALNQPHTSMKVKEIKENLKGKRLILGVDDMDIFKGIGLKLLAMEQLLKQHPELRGNVVLVQILNPARSNGNDVQEAKRETYEITKRINKVFGCPGYEPVILIDHAIPPHEKIAYYVLAECCIVNALRDGMNLVPYEYIVCRQGTSKMDELLEVSPDSPRTSTIVVSEFIGCSPSLSGAVRVNPWDFDAVADALYAAVTMPALEKQLRHEKHYRYVSSHDVAYWARSFSQDLERACREHYSKRCWGIGFGLGFRILSLSPSFRKLSIEHIGSAYRSASRRAIFLDYDGTVVSETSLVKSPSPEVISIINNLCMDSKNTVFIVSGRGKDSLGSWFDSCKNLGIAAEHGYYLRWNRDSDWEVSPLAENFCWKRIAEPVMKLYTEATDGSYIETKDSALVWHHQDADPYFGSCQAMELLDHLENVLANEPVVVKRGQQIVEVKPQGVTKGLVAERVLSTMINSNKAPDFVLCIGDDRSDEDMFESISSRSYSSSLASPPKIFACTVGQKPSKAKYYLDDTTDVLTLLQSLATPSTRKLRPSFETRVLFEDDEDNCLDRVSWFGGVNNSFHDTRSSLLPDSRVAEQDPLEPRNANHGSHLYPVSEAADYNPRFPPNNSSNVLPDSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 1083
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25744451 25753323 - Lsi06G015400.1 Lsi06g01540 666270

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g01540 1083 Pfam Trehalose-phosphatase 589 823 IPR003337 GO:0003824|GO:0005992
Lsi06g01540 1083 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824|GO:0005992
Lsi06g01540 1083 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 845 IPR001830 GO:0003824|GO:0005992
Lsi06g01540 1083 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 587 788 IPR006379 -
Lsi06g01540 1083 SUPERFAMILY HAD-like 586 834 IPR036412 -
Lsi06g01540 1083 TIGRFAM T6PP: trehalose-phosphatase 583 834 IPR003337 GO:0003824|GO:0005992
Lsi06g01540 1083 Gene3D Glycogen Phosphorylase B; 307 523 - -
Lsi06g01540 1083 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 845 - -
Lsi06g01540 1083 CDD GT20_TPS 54 539 IPR001830 GO:0003824|GO:0005992
Lsi06g01540 1083 CDD HAD_TPP 587 826 - -
Lsi06g01540 1083 Gene3D - 585 699 IPR023214 -
Lsi06g01540 1083 Gene3D - 715 844 IPR023214 -
Lsi06g01540 1083 Gene3D Glycogen Phosphorylase B; 46 306 - -
Lsi06g01540 1083 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 543 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g01540 K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] - csv:101209676 1647.1
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g01053 Lsi-Chr6:20757151 Lsi06g01540 Lsi-Chr6:25744451 1.51E-16 dispersed
Lsi06g01540 Lsi-Chr6:25744451 Lsi11g01715 Lsi-Chr11:25256976 3.73E-74 dispersed
Lsi08g01228 Lsi-Chr8:20735277 Lsi06g01540 Lsi-Chr6:25744451 2.34E-06 dispersed
Lsi01g00224 Lsi-Chr1:2036636 Lsi06g01540 Lsi-Chr6:25744451 0 transposed
Lsi02g00848 Lsi-Chr2:7945172 Lsi06g01540 Lsi-Chr6:25744451 6.64E-113 transposed
Lsi04g01978 Lsi-Chr4:26807945 Lsi06g01540 Lsi-Chr6:25744451 1.17E-125 transposed
Lsi07g01179 Lsi-Chr7:17303864 Lsi06g01540 Lsi-Chr6:25744451 0 transposed
Lsi11g01716 Lsi-Chr11:25258732 Lsi06g01540 Lsi-Chr6:25744451 0 transposed
Lsi04g00531 Lsi-Chr4:4900865 Lsi06g01540 Lsi-Chr6:25744451 3.44E-83 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g717 . . Bda06g00586 . . . . . . . Cma10g00135 Cma11g00105 Car10g00127 . Sed08g0139 . Cpe04g01547 Bhi02g00424 Tan09g2229 Cmetu02g0557 . Hepe09g0190 . . Cla06g01651 Cam06g1835 Cec06g1886 Cco06g1891 Clacu06g1795 Cmu06g1737 Cre06g2555 . . . . . . . . . Blo15g00275 . . Bpe07g00827 . . . . Cmo10g00141 Cmo11g00107 . . . . . Cpe18g00836 . . . . . . . . . . . . . . Lsi06g01540 Csa01g00164 Chy02g02567 Cme02g01956
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lsi09g00174 . 45 468 Trehalose Biosynthesis Gene Families AT4G24040 57.2 1.2e-140 497.3
Lsi01g00224 . 1 846 Trehalose Biosynthesis Gene Families AT1G06410 75.4 0.0e+00 1348.6
Lsi07g01179 . 1 844 Trehalose Biosynthesis Gene Families AT1G06410 66.5 0.0e+00 1152.1
Lsi11g01716 . 4 644 Trehalose Biosynthesis Gene Families AT1G06410 77.2 2.8e-310 1061.2
Lsi06g01540 . 1 837 Trehalose Biosynthesis Gene Families AT1G06410 60.0 1.7e-304 1042.0
Lsi11g01715 . 5 183 Trehalose Biosynthesis Gene Families AT1G06410 80.4 1.9e-77 287.7
Lsi04g00531 . 1 182 Trehalose Biosynthesis Gene Families AT1G06410 62.6 1.1e-61 235.3
Lsi04g01978 . 85 696 Trehalose Biosynthesis Gene Families AT1G16980 66.2 1.0e-248 856.3
Lsi02g00848 . 94 714 Trehalose Biosynthesis Gene Families AT1G16980 61.4 9.9e-231 796.6
Lsi06g01540 . 1 852 Trehalose Biosynthesis Gene Families AT1G23870 66.8 0.0e+00 1215.7
Lsi07g01179 . 1 843 Trehalose Biosynthesis Gene Families AT1G23870 62.6 0.0e+00 1108.2
Lsi01g00224 . 1 847 Trehalose Biosynthesis Gene Families AT1G23870 61.2 0.0e+00 1098.2
Lsi11g01716 . 5 645 Trehalose Biosynthesis Gene Families AT1G23870 61.3 1.3e-251 866.3
Lsi04g00531 . 3 188 Trehalose Biosynthesis Gene Families AT1G23870 73.0 2.2e-73 274.2
Lsi11g01715 . 3 184 Trehalose Biosynthesis Gene Families AT1G23870 59.9 8.5e-57 219.2
Lsi06g01540 . 1 852 Trehalose Biosynthesis Gene Families AT1G60140 68.3 0.0e+00 1232.6
Lsi07g01179 . 1 848 Trehalose Biosynthesis Gene Families AT1G60140 59.8 0.0e+00 1079.7
Lsi01g00224 . 1 851 Trehalose Biosynthesis Gene Families AT1G60140 60.6 0.0e+00 1078.5
Lsi11g01716 . 6 642 Trehalose Biosynthesis Gene Families AT1G60140 60.1 2.6e-239 825.5
Lsi04g00531 . 3 194 Trehalose Biosynthesis Gene Families AT1G60140 69.8 7.6e-74 275.8
Lsi11g01715 . 3 187 Trehalose Biosynthesis Gene Families AT1G60140 61.1 3.7e-60 230.3
Lsi07g01179 . 1 847 Trehalose Biosynthesis Gene Families AT1G68020 71.7 0.0e+00 1270.4
Lsi01g00224 . 1 847 Trehalose Biosynthesis Gene Families AT1G68020 64.3 0.0e+00 1161.4
Lsi06g01540 . 1 835 Trehalose Biosynthesis Gene Families AT1G68020 62.7 0.0e+00 1095.9
Lsi11g01716 . 6 647 Trehalose Biosynthesis Gene Families AT1G68020 63.1 2.1e-257 885.6
Lsi11g01715 . 9 186 Trehalose Biosynthesis Gene Families AT1G68020 65.2 1.0e-62 238.8
Lsi04g00531 . 8 180 Trehalose Biosynthesis Gene Families AT1G68020 66.5 1.0e-62 238.8
Lsi06g01540 . 1 852 Trehalose Biosynthesis Gene Families AT1G70290 63.4 0.0e+00 1105.5
Lsi01g00224 . 1 850 Trehalose Biosynthesis Gene Families AT1G70290 57.1 7.3e-292 1000.0
Lsi07g01179 . 1 853 Trehalose Biosynthesis Gene Families AT1G70290 56.5 3.9e-285 977.6
Lsi11g01716 . 6 645 Trehalose Biosynthesis Gene Families AT1G70290 57.8 1.0e-221 766.9
Lsi04g00531 . 3 182 Trehalose Biosynthesis Gene Families AT1G70290 72.8 6.8e-72 269.2
Lsi11g01715 . 3 193 Trehalose Biosynthesis Gene Families AT1G70290 59.4 9.5e-58 222.2
Lsi04g01978 . 1 922 Trehalose Biosynthesis Gene Families AT1G78580 79.4 0.0e+00 1479.2
Lsi02g00848 . 8 950 Trehalose Biosynthesis Gene Families AT1G78580 71.0 0.0e+00 1322.4
Lsi06g01540 . 10 837 Trehalose Biosynthesis Gene Families AT2G18700 60.2 1.4e-301 1032.3
Lsi01g00224 . 1 843 Trehalose Biosynthesis Gene Families AT2G18700 58.9 1.0e-299 1026.2
Lsi07g01179 . 1 844 Trehalose Biosynthesis Gene Families AT2G18700 58.4 9.3e-298 1019.6
Lsi11g01716 . 5 645 Trehalose Biosynthesis Gene Families AT2G18700 57.1 2.2e-230 795.8
Lsi04g00531 . 3 182 Trehalose Biosynthesis Gene Families AT2G18700 65.2 1.1e-61 235.3
Lsi11g01715 . 3 183 Trehalose Biosynthesis Gene Families AT2G18700 61.5 2.6e-53 207.6
Lsi07g01179 . 1 839 Trehalose Biosynthesis Gene Families AT4G17770 79.3 0.0e+00 1379.8
Lsi01g00224 . 1 839 Trehalose Biosynthesis Gene Families AT4G17770 67.0 0.0e+00 1182.5
Lsi06g01540 . 1 838 Trehalose Biosynthesis Gene Families AT4G17770 62.6 0.0e+00 1107.0
Lsi11g01716 . 4 642 Trehalose Biosynthesis Gene Families AT4G17770 63.7 2.9e-259 891.7
Lsi11g01715 . 3 191 Trehalose Biosynthesis Gene Families AT4G17770 60.3 2.1e-63 241.1
Lsi04g00531 . 7 182 Trehalose Biosynthesis Gene Families AT4G17770 61.9 3.0e-62 237.3
Lsi04g01978 . 93 925 Trehalose Biosynthesis Gene Families AT4G27550 62.7 1.2e-304 1042.3
Lsi02g00848 . 98 944 Trehalose Biosynthesis Gene Families AT4G27550 57.4 1.4e-276 949.1
Lsi04g01978 . 1 922 Trehalose Biosynthesis Gene Families AT1G78580 79.4 0.0e+00 1479.2
Lsi02g00848 . 8 950 Trehalose Biosynthesis Gene Families AT1G78580 71.0 0.0e+00 1322.4
Lsi04g01978 . 85 696 Trehalose Biosynthesis Gene Families AT1G16980 66.2 1.0e-248 856.3
Lsi02g00848 . 94 714 Trehalose Biosynthesis Gene Families AT1G16980 61.4 9.9e-231 796.6
Lsi04g01978 . 83 621 Trehalose Biosynthesis Gene Families AT1G17000 62.3 1.0e-194 677.2
Lsi02g00848 . 99 629 Trehalose Biosynthesis Gene Families AT1G17000 57.9 2.7e-179 625.9
Lsi04g01978 . 93 925 Trehalose Biosynthesis Gene Families AT4G27550 62.7 1.2e-304 1042.3
Lsi02g00848 . 98 944 Trehalose Biosynthesis Gene Families AT4G27550 57.4 1.4e-276 949.1
Lsi07g01179 . 1 839 Trehalose Biosynthesis Gene Families AT4G17770 79.3 0.0e+00 1379.8
Lsi01g00224 . 1 839 Trehalose Biosynthesis Gene Families AT4G17770 67.0 0.0e+00 1182.5
Lsi06g01540 . 1 838 Trehalose Biosynthesis Gene Families AT4G17770 62.6 0.0e+00 1107.0
Lsi11g01716 . 4 642 Trehalose Biosynthesis Gene Families AT4G17770 63.7 2.9e-259 891.7
Lsi11g01715 . 3 191 Trehalose Biosynthesis Gene Families AT4G17770 60.3 2.1e-63 241.1
Lsi04g00531 . 7 182 Trehalose Biosynthesis Gene Families AT4G17770 61.9 3.0e-62 237.3
Lsi07g01179 . 1 847 Trehalose Biosynthesis Gene Families AT1G68020 71.7 0.0e+00 1270.4
Lsi01g00224 . 1 847 Trehalose Biosynthesis Gene Families AT1G68020 64.3 0.0e+00 1161.4
Lsi06g01540 . 1 835 Trehalose Biosynthesis Gene Families AT1G68020 62.7 0.0e+00 1095.9
Lsi11g01716 . 6 647 Trehalose Biosynthesis Gene Families AT1G68020 63.1 2.1e-257 885.6
Lsi11g01715 . 9 186 Trehalose Biosynthesis Gene Families AT1G68020 65.2 1.0e-62 238.8
Lsi04g00531 . 8 180 Trehalose Biosynthesis Gene Families AT1G68020 66.5 1.0e-62 238.8
Lsi01g00224 . 1 846 Trehalose Biosynthesis Gene Families AT1G06410 75.4 0.0e+00 1348.6
Lsi07g01179 . 1 844 Trehalose Biosynthesis Gene Families AT1G06410 66.5 0.0e+00 1152.1
Lsi11g01716 . 4 644 Trehalose Biosynthesis Gene Families AT1G06410 77.2 2.8e-310 1061.2
Lsi06g01540 . 1 837 Trehalose Biosynthesis Gene Families AT1G06410 60.0 1.7e-304 1042.0
Lsi11g01715 . 5 183 Trehalose Biosynthesis Gene Families AT1G06410 80.4 1.9e-77 287.7
Lsi04g00531 . 1 182 Trehalose Biosynthesis Gene Families AT1G06410 62.6 1.1e-61 235.3
Lsi06g01540 . 1 852 Trehalose Biosynthesis Gene Families AT1G70290 63.4 0.0e+00 1105.5
Lsi01g00224 . 1 850 Trehalose Biosynthesis Gene Families AT1G70290 57.1 7.3e-292 1000.0
Lsi07g01179 . 1 853 Trehalose Biosynthesis Gene Families AT1G70290 56.5 3.9e-285 977.6
Lsi11g01716 . 6 645 Trehalose Biosynthesis Gene Families AT1G70290 57.8 1.0e-221 766.9
Lsi04g00531 . 3 182 Trehalose Biosynthesis Gene Families AT1G70290 72.8 6.8e-72 269.2
Lsi11g01715 . 3 193 Trehalose Biosynthesis Gene Families AT1G70290 59.4 9.5e-58 222.2
Lsi06g01540 . 1 852 Trehalose Biosynthesis Gene Families AT1G23870 66.8 0.0e+00 1215.7
Lsi07g01179 . 1 843 Trehalose Biosynthesis Gene Families AT1G23870 62.6 0.0e+00 1108.2
Lsi01g00224 . 1 847 Trehalose Biosynthesis Gene Families AT1G23870 61.2 0.0e+00 1098.2
Lsi11g01716 . 5 645 Trehalose Biosynthesis Gene Families AT1G23870 61.3 1.3e-251 866.3
Lsi04g00531 . 3 188 Trehalose Biosynthesis Gene Families AT1G23870 73.0 2.2e-73 274.2
Lsi11g01715 . 3 184 Trehalose Biosynthesis Gene Families AT1G23870 59.9 8.5e-57 219.2
Lsi06g01540 . 1 852 Trehalose Biosynthesis Gene Families AT1G60140 68.3 0.0e+00 1232.6
Lsi07g01179 . 1 848 Trehalose Biosynthesis Gene Families AT1G60140 59.8 0.0e+00 1079.7
Lsi01g00224 . 1 851 Trehalose Biosynthesis Gene Families AT1G60140 60.6 0.0e+00 1078.5
Lsi11g01716 . 6 642 Trehalose Biosynthesis Gene Families AT1G60140 60.1 2.6e-239 825.5
Lsi04g00531 . 3 194 Trehalose Biosynthesis Gene Families AT1G60140 69.8 7.6e-74 275.8
Lsi11g01715 . 3 187 Trehalose Biosynthesis Gene Families AT1G60140 61.1 3.7e-60 230.3
Lsi06g01540 . 10 837 Trehalose Biosynthesis Gene Families AT2G18700 60.2 1.4e-301 1032.3
Lsi01g00224 . 1 843 Trehalose Biosynthesis Gene Families AT2G18700 58.9 1.0e-299 1026.2
Lsi07g01179 . 1 844 Trehalose Biosynthesis Gene Families AT2G18700 58.4 9.3e-298 1019.6
Lsi11g01716 . 5 645 Trehalose Biosynthesis Gene Families AT2G18700 57.1 2.2e-230 795.8
Lsi04g00531 . 3 182 Trehalose Biosynthesis Gene Families AT2G18700 65.2 1.1e-61 235.3
Lsi11g01715 . 3 183 Trehalose Biosynthesis Gene Families AT2G18700 61.5 2.6e-53 207.6
Lsi09g00174 . 45 468 Trehalose Biosynthesis Gene Families AT4G24040 57.2 1.2e-140 497.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000820 3 9 5 4 5 2 1 2 2 2 2 2 4 2 2 4 2 4 4 2 2 2 2 2 2 1 2 6 7 2 91
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Lsi06g01540 Lsi_Chr06 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0