Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi06g01591 ATGGATGGAAATATGGAGACTCTTCTTCTTCCTCTTCAACTGTCACTTCGTTCAATTTCCTTCACTGGTTTCATCCTCATCTTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCTCTTCAAAAACCTCACCTCCATCTCCACCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCCCATCTCACTCTGCTAAACTACGCCCGCCGTCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCGTCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCATCTTTTCCAACCGACCCAAATCAAGCATCGGCCACAAAATTCTTTACAGCTCCAGAGATATAGCTGCTTCTCCATACGGCGAGTACTGGAGGCAGATGAAAAGCATTTGCGTTCTTCATCTCTTGAGCAACAAAAGGGTTCAATCCTTTCGTTCTATAAGAGAAGAAGAGGTTAAATTGACTATTGAAAAGATCCAACGCAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACGAACGATGTGGTTTGCAGAGTGGGGTTAGGGAGAAAATATGGAGTGGGAGAAGATGGGAAGAAATTCATGGGTCTTTTATTGGAATTTGGTCAATTATTGGGGAGTTTTAGCATTAGAGATTTCATTCCTTGGCTGGGTTGGATCGATGGGATTACTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTGATAGAGTGATTGAAGATCATATCAATCCAGAAAACAGAGACCAGAATCGTGAAGAGCATAAGGATTTAGTAGATGTTCTGCTTTGGATACAGAGAGAAAAATCCATTGGTTTTCCCCTTGAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACGACTTACACAGTATTGGAATGGGCAATGTCAGAATTGTTGAAACATCCAGAAGCCATGAAGAAACTGAAGGATGAAATTAGAGAAATAAAAGGAGATGACAAAGGAAGCTATGTAAATGAGGATGATTTAGACAAAATGGTTTATTTAAAGGCAATAATCAAAGAGACGTTGCGACTACACCCGCCCATCCCACTTCTCGTCCCCAGAGAATCAACCCAACACATAAAATTAAGAGAGTACGAAATTAAACCCGAGACTCGAGTTATGATCAATGCATGGGCAATCGGAAGAGACCCAAAACTATGGGAAGAAGCAGAGGAGTTTAAGCCAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTAATCCCATTTGGTGCAGGAAGAAGAGGATGTCCTGGAATTGCATTTGCAACTGTAATTAATGAGATAGCTTTAGCAAATTTGGTGCATAAGTTTGAATGGATGTTGCCTAATGGTGAGGATTTGGACATGACAGGAGCCTTTGGGTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACGGCAATTCCTTGTTAG 1521 42.27 MDGNMETLLLPLQLSLRSISFTGFILIFIFLLQKWLLSSSKTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARRHGPLFLLRLGSVPTIVVSSSDLARDIMKTHDLIFSNRPKSSIGHKILYSSRDIAASPYGEYWRQMKSICVLHLLSNKRVQSFRSIREEEVKLTIEKIQRNPVSVNLTEIFSGLTNDVVCRVGLGRKYGVGEDGKKFMGLLLEFGQLLGSFSIRDFIPWLGWIDGITGLDSKANRVAKELDDFFDRVIEDHINPENRDQNREEHKDLVDVLLWIQREKSIGFPLEMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMKKLKDEIREIKGDDKGSYVNEDDLDKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLREYEIKPETRVMINAWAIGRDPKLWEEAEEFKPERFMNNSIDFKGQDFELIPFGAGRRGCPGIAFATVINEIALANLVHKFEWMLPNGEDLDMTGAFGLTIHRKFPLVATAIPC 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26302596 26305265 - Lsi06G015910.1 Lsi06g01591 666321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi06g01591 506 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 Gene3D Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 Pfam Cytochrome P450 44 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Lsi06g01591 506 SUPERFAMILY Cytochrome P450 44 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi06g01591 506 PANTHER CYTOCHROME P450 71A21-RELATED 24 503 - -
Lsi06g01591 506 PANTHER CYTOCHROME P450 71B11-RELATED 24 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00436 Lsi-Chr2:3616233 Lsi06g01591 Lsi-Chr6:26302596 6.54E-118 dispersed
Lsi02g00437 Lsi-Chr2:3632545 Lsi06g01591 Lsi-Chr6:26302596 5.60E-146 dispersed
Lsi02g00440 Lsi-Chr2:3659479 Lsi06g01591 Lsi-Chr6:26302596 3.04E-149 dispersed
Lsi02g00442 Lsi-Chr2:3681176 Lsi06g01591 Lsi-Chr6:26302596 8.89E-96 dispersed
Lsi06g01591 Lsi-Chr6:26302596 Lsi04g00625 Lsi-Chr4:5718525 6.77E-143 dispersed
Lsi02g00426 Lsi-Chr2:3517047 Lsi06g01591 Lsi-Chr6:26302596 7.55E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi06g01591 - - cmo:103502374 824.313