Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00151 ATGAAAATGATGTTAGTTAGGATGGGAGAACTCTATCTTACAATTCTAATACTGGCTTGCTTTCATTATCTTGCACTGTCTGATTTTCAAGGTGATGCACTCTTTGCATTGAAGAATGCATTGAATGCAACAGGAAATCAGCTCGCAGATTGGAACCCAAATCAAGTCAATCCGTGTACTTGGTCCAATGTTATATGTAGTGGAAACAATGTGATCTCTGTATCCTTGTCCACAATGGGATTTACTGGAACCTTGTCTCCACGAATTGGACTTCTAAAATCACTTTCAACCCTGATTTTGCAGGGAAATTACATAACTGGAGAGATACCAAAGGATTTTGGAAACCTGACAAATTTGGTTAGTTTGGATTTGGGAAATAACAGCCTAACCGGCCAAATACCATCGTCCCTCGGTAATCTTAAGAAACTACAGTTCCTAACTCTGAGTCAAAATCGTCTAACGGGGACTATTCCCGAGTCACTTTCAACCCTTCCTAGCTTGATCAATCTTCTGCTTGATTCGAATGATCTCAGTGGTCCAATTCCACAGCAGTTATTTCAAGTTCCAAAATTCAACTTTTCTGCAAACAAGTTAAATTGTGGCGGGAAGTCTCTTCATGCCTGTGCTTCAGACAGTACAAACTCAGGTTCTTCAAATAAACCCAAGGTTGGCCTTATAGTTGGAATAATTGCTGGGTTTACCGTTGCTCTTCTTTTGGTCGGAGTATTATTTTTCTTGTCCAAGGGGAGATATAAAAGCTACAAGCGCGAAGTGTTTGTAGATGTTGCAGGTGAAGTTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAGCTAGCTACAGACAACTTTAGTGAGAAAAATGTTTTAGGACAAGGAGGCTTTGGAAAGGTGTACAAAGGGGTGCTTGCAGATGGCACCAAAGTTGCTGTGAAACGGTTGACTGATTATGAAAGTCCAGGGGGAGATGCTGCTTTTCAGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTGTTGCGTCTCATTGGGTTCTGTACAACTCAGACAGAACGCCTATTGGTGTATCCCTTTATGCAAAACTTGAGTGTTGCCTACCGTCTTCGAGAACTTAAGCCCGGAGAGGCTGTTCTAGATTGGCCTACTCGAAAACGGGTGGCATTGGGCACAGCTCGTGGTTTAGAGTATCTTCATGAACATTGCAACCCAAAGATTATTCATCGGGATGTCAAGGCAGCTAATGTATTGCTTGATGAAGATTTTGAAGCAGTTGTTGGCGATTTTGGCTTAGCAAAGTTGGTTGATGTTAGGAAGACTAATGTCACTACTCAAGTTCGAGGGACAATGGGTCACATAGCACCGGAGTACTTATCTACTGGAAAATCATCCGAAAGGACTGATGTTTTTGGTTATGGTATCATGCTTTTAGAACTTGTTACGGGACAACGTGCAATCGACTTCTCACGCTTAGAAGAAGAAGACGATGTTTTACTGCTCGACCATGTTAAGAAACTAGAAAGGGAGAAACGACTTGATGCCATTGTCGATCGAAATCTAAATAACTACAACATTCAAGAGGTGGAGATGATGATTCAAGTTGCTTTGCTGTGCACACAGCCATGCTCGGATGACCGTCCAGCAATGTCACAAGTCGTTCGGATGCTCGAGGGAGAGGGATTAGCAGAGAGGTGGGAAGAATGGCAGCATTTGGAGGTGACTCGCAGGCAAGAGTATGAGAGACTGCAGAGAAGATTTGAATGGGGGGAAGATTCAATACATAGACAGGATGCAATCCAGTTATCTGGTGGAAGATGA 1839 42.52 MKMMLVRMGELYLTILILACFHYLALSDFQGDALFALKNALNATGNQLADWNPNQVNPCTWSNVICSGNNVISVSLSTMGFTGTLSPRIGLLKSLSTLILQGNYITGEIPKDFGNLTNLVSLDLGNNSLTGQIPSSLGNLKKLQFLTLSQNRLTGTIPESLSTLPSLINLLLDSNDLSGPIPQQLFQVPKFNFSANKLNCGGKSLHACASDSTNSGSSNKPKVGLIVGIIAGFTVALLLVGVLFFLSKGRYKSYKREVFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLADGTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNNYNIQEVEMMIQVALLCTQPCSDDRPAMSQVVRMLEGEGLAERWEEWQHLEVTRRQEYERLQRRFEWGEDSIHRQDAIQLSGGR 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1615746 1624101 + Lsi07G001510.1 Lsi07g00151 666573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00151 612 Pfam Protein kinase domain 291 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi07g00151 612 Gene3D Ribonuclease Inhibitor 28 209 IPR032675 -
Lsi07g00151 612 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Lsi07g00151 612 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Lsi07g00151 612 Gene3D Transferase(Phosphotransferase) domain 1 367 583 - -
Lsi07g00151 612 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 612 - -
Lsi07g00151 612 SMART serkin_6 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lsi07g00151 612 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 612 - -
Lsi07g00151 612 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Lsi07g00151 612 Gene3D Phosphorylase Kinase; domain 1 259 366 - -
Lsi07g00151 612 SUPERFAMILY Protein kinase-like (PK-like) 270 564 IPR011009 -
Lsi07g00151 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Lsi07g00151 612 SUPERFAMILY L domain-like 30 198 - -
Lsi07g00151 612 ProSiteProfiles Protein kinase domain profile. 290 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g00151 Lsi-Chr7:1615746 Lsi07g00190 Lsi-Chr7:2064152 0 dispersed
Lsi07g00151 Lsi-Chr7:1615746 Lsi07g00152 Lsi-Chr7:1630922 1.51E-143 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83761 PF00069 Pkinase 1.90E-42 CL0016 Lsi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00151 - - csv:116403405 1152.5