Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g00158 | ATGGAATTTACGGGCGGCCCCAACTGGGCAGTACGATTGGGGCGGCTGGACAGCTTAACAGCAAGCCAAGAAGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAACTTCTCTCATTGACCTTTTCAACAAATACAACCTCTCTGTTAAAGATTTGGTTTCTCTTTCGGGTTCGCATTCGATCGGCCAAGGCCGGTGTTTCTCCATTATGTTTCGACTCTACAACCAGTCTGGCACGGGACAGCCGGACCCGGCCATCGAGCCGAGATTCAGAGAAGAGCTATTCAAGCGATGCCCTCAAGGTGGGGATGAAAATGTCACAGTCAACCTTGACTCCACACCTTATGTTTTTGACAATCAGTACTTCAAGGATTTGGTTGGTGGGAGAGGATTCTTGAATTCTGATGAAACTCTTTACACATTTTCTGGAACTAGAAGGTATGTGAGATTCTTTAGCCAAAATCAAAGGGCATTTTTCAGGGCATTTGTGGAGGGTATGTTGAAGATGGGTGACTTGCAGTCTGGCCGCCCAGGGGAACTGATTTTACAAAACCTCGAAAAACGAATTTAA | 576 | 46.53 | MEFTGGPNWAVRLGRLDSLTASQEDSNQIMPSPRANATSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGQPDPAIEPRFREELFKRCPQGGDENVTVNLDSTPYVFDNQYFKDLVGGRGFLNSDETLYTFSGTRRYVRFFSQNQRAFFRAFVEGMLKMGDLQSGRPGELILQNLEKRI | 191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1675398 | 1680791 | - | Lsi07G001580.1 | Lsi07g00158 | 666580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g00158 | 191 | Pfam | Peroxidase | 2 | 156 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | Gene3D | - | 3 | 175 | - | - | |
Lsi07g00158 | 191 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 182 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | Gene3D | Peroxidase, domain 2 | 31 | 171 | - | - | |
Lsi07g00158 | 191 | SUPERFAMILY | Heme-dependent peroxidases | 2 | 175 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PANTHER | PEROXIDASE 72-RELATED | 3 | 182 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 53 | 63 | IPR019793 | - | |
Lsi07g00158 | 191 | PANTHER | PEROXIDASE 17 | 3 | 182 | - | - | |
Lsi07g00158 | 191 | PRINTS | Plant peroxidase signature | 5 | 20 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Plant peroxidase signature | 126 | 143 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Plant peroxidase signature | 166 | 179 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Plant peroxidase signature | 110 | 125 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Plant peroxidase signature | 52 | 64 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Haem peroxidase superfamily signature | 53 | 68 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Haem peroxidase superfamily signature | 112 | 127 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Lsi07g00158 | 191 | PRINTS | Haem peroxidase superfamily signature | 5 | 17 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi07g00158 | Lsi-Chr7:1675398 | Lsi03g00400 | Lsi-Chr3:4580677 | 1.28E-39 | dispersed | |
Lsi07g00158 | Lsi-Chr7:1675398 | Lsi01g00641 | Lsi-Chr1:5166953 | 9.54E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g00158 | K00430 | - | csv:116406090 | 323.939 |