Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00205 ATGTTTCACTTTCACACTCAGCTTATACTCTGTTTTCTCCCTTCTCTTTTAGCTCTCTTCCTCTTCCTCATTCTGCTTCGACGGAAGAGAAATGCCATCCATCTTGATCTTCCCCCCGGAAGCATGGGCTGGCCGTTTCTCGGCGAGACCATCGGCTATCTCCGGCCCTATTCCGCCACCACAATCGGAGTTTTCATGGAGAGTCACATCAAGAGATATGGTAAAGTGTACAAGTCGAACCTGTTCGGAGAGCCGACGGTGGTGTCGGCCGATCCCGGGCTGAACCGGTACATCCTGCAAAACGAAGGGCGGCTGTTTGAATGCAGCTACCCGCGGAGCATCGGTGGGATTCTTGGGAAATGGTCGATGCTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCTCTGAACTTTCTGAGTCAGAGTAGGCTCAAGAATCATCTCTTGAAGGAGGTTGAGAACCAGACGCTTCTCGTCCTCCGTTCTTGGAAAGATTCTTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTCACTTTCAATTTAATGGCGAAACATATCATGAGTTTGGATCCATGGAAGTTGGAGACGGAAATGTTGAAGAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCCCCGCTCAATCTTCCCGGAACGCCGTACAGACGAGCTCTTAAGTCTCGGTCGACGATCTTGAAGTTCATCGAACGGAAAATGGAGGAACGGAAGTTCAAAATGGAAGCCGACGGCGGTGATTTCGAGGATGATGATCTACTCGGTTGGGCATTGAAGCACTCAAGTCTCTCGACGGAGCAAATCCTCGACCTGATTCTTAGCTTGCTATTCGCCGGCCACGAAACGTCTTCGGTAGCCATAGCTTTAGCCATCTTCTTCCTCTCCGGCAGCCCGGCTGCCGTTCAACAGTTGACGGAAGAACACCTTGAAATCGCCAGAGGCAATAAGCGATTGGGAAAGACGGAATTGGATTGGGAAGATTACAAGAAAATGGAATTCACGCAAAGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTGAGATTTCTTCATAGAAAGGCACTGAAGGATGTACGGTACAGAGGTTATTTCATTCCACGTGGATGGAAAGTGCTTCCAGTGATTTCTGCAGCGCATTTGGATCCTCTAGTTTTTGACCAACCTCATCACTTTAATCCATGGAGGTGGCAGCAAATGAATGCATCACCAATGGGTATCCCGAGCACGACAATAACCAATAATTTCATGCCATTTGGCGGAGGACCGCGACTGTGCACTGGTTCAGAACTAGCAAAGCTTGAAATGGCCATTTTTATCCATCATTTGGTATTGAACTACCAATGGGAGTTGGTAGATTCAGATCAAGCTTTTGCTTACCCTTTTGTTGACTTCCCTAAAGGTCTACCAATCAGAGTCCGCCATCACACTCTCGTATAA 1470 48.16 MFHFHTQLILCFLPSLLALFLFLILLRRKRNAIHLDLPPGSMGWPFLGETIGYLRPYSATTIGVFMESHIKRYGKVYKSNLFGEPTVVSADPGLNRYILQNEGRLFECSYPRSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKNHLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRRALKSRSTILKFIERKMEERKFKMEADGGDFEDDDLLGWALKHSSLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPAAVQQLTEEHLEIARGNKRLGKTELDWEDYKKMEFTQSVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDPLVFDQPHHFNPWRWQQMNASPMGIPSTTITNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVDSDQAFAYPFVDFPKGLPIRVRHHTLV 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2230672 2236545 + Lsi07G002050.1 Lsi07g00205 666627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00205 489 Pfam Cytochrome P450 38 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PANTHER CYTOCHROME P450 26 17 463 - -
Lsi07g00205 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 Gene3D Cytochrome P450 26 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00205 489 PANTHER CYTOCHROME P450 90B1 17 463 - -
Lsi07g00205 489 SUPERFAMILY Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01608 Lsi-Chr2:21968163 Lsi07g00205 Lsi-Chr7:2230672 3.00E-92 dispersed
Lsi02g02944 Lsi-Chr2:35584038 Lsi07g00205 Lsi-Chr7:2230672 2.09E-85 dispersed
Lsi03g00183 Lsi-Chr3:2423987 Lsi07g00205 Lsi-Chr7:2230672 1.74E-96 dispersed
Lsi04g00972 Lsi-Chr4:10286056 Lsi07g00205 Lsi-Chr7:2230672 2.66E-62 dispersed
Lsi04g01563 Lsi-Chr4:23194296 Lsi07g00205 Lsi-Chr7:2230672 6.46E-78 dispersed
Lsi07g00205 Lsi-Chr7:2230672 Lsi07g01388 Lsi-Chr7:20145497 8.01E-98 dispersed
Lsi07g00564 Lsi-Chr7:5994952 Lsi07g00205 Lsi-Chr7:2230672 2.77E-59 dispersed
Lsi08g01378 Lsi-Chr8:22068324 Lsi07g00205 Lsi-Chr7:2230672 5.69E-64 dispersed
Lsi09g01533 Lsi-Chr9:23449532 Lsi07g00205 Lsi-Chr7:2230672 3.22E-08 dispersed
Lsi11g01644 Lsi-Chr11:24754154 Lsi07g00205 Lsi-Chr7:2230672 7.32E-50 dispersed
Lsi07g00204 Lsi-Chr7:2221600 Lsi07g00205 Lsi-Chr7:2230672 3.34E-112 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00205 K09587 - csv:101211854 901.353