Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g00383 | ATGCCCCGAAAGGTTTTTGCTCATCAAAATGGTTCAATGGGGAGCTTGTGCAACACCCTTCAAGATCCACTCAACTGGGGTATGGCAGCTGAGTCCATGAAGGGAAGTCATTTGGATGAGGTGAAGCGAATGGTCGAAGAGTATCGGATGCCTTCGGTGAAGCTTGGAGGACAAACTCTCACCATTTCTCAAGTTGCTGCCATTGCTACTCGTGACAACGATGTCATCGTAGAATTGGCTGAGTCTGCGAGGGCTGGTGTCAAAGCTAGCAGCGACTGGGTCATGGAAAGCATGAGCAAAGGTACTGACAGCTATGGTGTCACTACTAGATTTGGTGCCACTTCTCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGCTTATTCGATTCTTGAATTCTGGCATATTTGGGAGCGGTGCTGAGTAG | 432 | 48.15 | MPRKVFAHQNGSMGSLCNTLQDPLNWGMAAESMKGSHLDEVKRMVEEYRMPSVKLGGQTLTISQVAAIATRDNDVIVELAESARAGVKASSDWVMESMSKGTDSYGVTTRFGATSHRRTNQGGALQKELIRFLNSGIFGSGAE | 143 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4111093 | 4111524 | - | Lsi07G003830.1 | Lsi07g00383 | 666805 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g00383 | 143 | PANTHER | PHENYLALANINE AMMONIA-LYASE 2 | 18 | 140 | - | - | |
Lsi07g00383 | 143 | SUPERFAMILY | L-aspartase-like | 22 | 139 | IPR008948 | GO:0003824 | |
Lsi07g00383 | 143 | Pfam | Aromatic amino acid lyase | 60 | 137 | IPR001106 | - | |
Lsi07g00383 | 143 | Gene3D | - | 13 | 143 | IPR024083 | - | |
Lsi07g00383 | 143 | PANTHER | HISTIDINE AMMONIA-LYASE | 18 | 140 | IPR001106 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi07g00383 | Lsi-Chr7:4111093 | Lsi07g00385 | Lsi-Chr7:4121676 | 2.16E-86 | dispersed | |
Lsi07g00383 | Lsi-Chr7:4111093 | Lsi07g00384 | Lsi-Chr7:4114890 | 2.27E-83 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g00383 | K10775 | - | csv:101204574 | 251.906 |