Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g00437 | ATGACGGACATCAGCTTGGAGGAGATCAAGAATGAGAACATTGATCTTGAGCGCATTCCCGTTGATGAAGTGTTTGAACAACTGAAATGCTCCCGAGAGGGTTTATCCTCAGAGGAGGGGCGTCAGAGGCTCCAACTCTTTGGCCCAAATAAGCTTGAAGAGAAAAAAGAAGATAAATTTCTCAAGTTTTTGGGCTTTATGTGGAATCCACTTTCATGGGTTATGGAAGCTGCAGCTATCATGGCCATAGTTCTTGCCAATGGAGGGGGGCAACCACCGGACTGGCAAGATTTTGTGGGGATTACTGCATTGCTTATTATCAATTCCACAATTAGTTTTATAGAGGAAAACAATGCAGGCAATGCTGCAGCTGCACTTATGGCAGGACTTGCACCAAAAACCAAGCAAGGTGAGATCGAGGCCGTTGTAATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCTCATTTGGTTGATAGCACAAATCAAGTGGGGCACTTCCAAAAGCGTACAGCTATTACATATATTGACAATGATGGCAACTGGCATCGAGTTAGCAAAGGAGCACCAGAGCAGATTATCGAACTTTGCGACCTCCGAGATGATATCAAGAAGAAGGCACATTCAATCATCGACAAATTCGCCGATCGTGGTCTTCGTTCTCTTGCTGTTTGCAGACAAACTGTTCCAGAAAAAACCAAAGAAAGTGCTGGAGGACCATGGCAATTTGTTGGTCTCTTGCCTCTCTTTGATCCTCCAAGGCATGACAGTGCAGAGACTATCCGAAGGGCACTCAATCTTGGTGTCAACGTTAAGATGATCACTGGTGACCAATTGGCAATTGGAAAGGAAACTGGGCGTAGACTTGGAATGGGCACAAACATGTACCCATCTTCCTCACTTCTTGGACAAAGCAAGGACGAGTCAATCGCTTCTTTGCCTGTTGATGAGCTTATTGAGAAGGCTGATGGATTTGCAGGCGTCTTCCCTGAGCACAAATATGAAATTGTGAGGAGGCTTCAAGAGAGGAAGCATATCTGTGGAATGACAGGAGATGGTGTGAATGATGCTCCAGCTTTGAAAAAGGCAGACATAGGAATTGCAGTTGCTGATGCAACTGATGCTGCAAGAAGCGCTTCTGATATAGTTTTGACAGAGCCAGGACTGAGTGTGATCGTGAGCGCTGTTTTAACAAGCAGAGCCATTTTCCAGAGAATGAAGAACTACACCATCTATGCAGTCTCAATAACCATCCGTATTGTACTTGGTTTTATGCTTATTGCACTCATTTGGAAATTTGACTTCTCCCCTTTCATGGTTTTGATCATAGCCATTCTCAATGATGGCACCATCATGACCATCTCTAAAGATAGAGTAAAACCCTCTCCTCTTCCTGATTCATGGAAGCTCCGTGAGATCTTTGCAACTGGCGTTGTCTTGGGCTCATACTTGGCTGTTATGACTGTTGTTTTCTTCTGGGTTGCTCACGCTACCGATTTCTTTACGGACAAATTTGGTGTACACTCCATCAGAGGAAATGAAGGTGAGCTCACAGCAGCTGTGTATCTTCAAGTCAGCACAGTGAGTCAAGCACTCATCTTTGTGACAAGATCTCGAAGCTGGTCCTTTATTGAACGCCCTGGTCTGCTCTTGGTGTTTGCTTTCTTCGTAGCACAGCTGGTGGCTACCCTGATTGCTGTATATGCCAACTGGGGCTTTGCTGACATGAAAGGAATTGGCTGGGGATGGGCAGGAGTGATCTGGATCTACAGCATAATCTTCTACATTCCTCTTGACGTTCTCAAGTTCGCTACTCGATATGCATTGAGTGGCAAGGCTTGGAATAATATGATCCAAAACAAGACTGCTTTCACATCAAAGAAGGATTATGGCATTGGCGAGAGGGAGGCTCAATGGGCTGCAGCTCAACGTACTCTTCATGGCCTACAGCCTCCTGAAACATCTGAACTCTTCAATGACAAAACCAATTACAGGGAGCTGTCCGAAATCGCTGAGCAAGCCAAGAAACGTGCTGAGGTCGCAAGCAACAAGGCACAGAAATCGTAA | 2070 | 45.56 | MTDISLEEIKNENIDLERIPVDEVFEQLKCSREGLSSEEGRQRLQLFGPNKLEEKKEDKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGQPPDWQDFVGITALLIINSTISFIEENNAGNAAAALMAGLAPKTKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKRTAITYIDNDGNWHRVSKGAPEQIIELCDLRDDIKKKAHSIIDKFADRGLRSLAVCRQTVPEKTKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASLPVDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLAVMTVVFFWVAHATDFFTDKFGVHSIRGNEGELTAAVYLQVSTVSQALIFVTRSRSWSFIERPGLLLVFAFFVAQLVATLIAVYANWGFADMKGIGWGWAGVIWIYSIIFYIPLDVLKFATRYALSGKAWNNMIQNKTAFTSKKDYGIGEREAQWAAAQRTLHGLQPPETSELFNDKTNYRELSEIAEQAKKRAEVASNKAQKS | 689 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4655089 | 4659262 | - | Lsi07G004370.1 | Lsi07g00437 | 666859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g00437 | 689 | SUPERFAMILY | HAD-like | 243 | 397 | IPR036412 | - | |
Lsi07g00437 | 689 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 4 | 135 | - | - | |
Lsi07g00437 | 689 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 134 | 170 | - | - | |
Lsi07g00437 | 689 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 14 | 610 | IPR023298 | - | |
Lsi07g00437 | 689 | SMART | Cation_ATPase_N_a_2 | 15 | 87 | IPR004014 | - | |
Lsi07g00437 | 689 | Coils | Coil | 665 | 685 | - | - | |
Lsi07g00437 | 689 | PRINTS | H+-transporting ATPase (proton pump) signature | 382 | 407 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi07g00437 | 689 | PRINTS | H+-transporting ATPase (proton pump) signature | 523 | 544 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi07g00437 | 689 | PRINTS | H+-transporting ATPase (proton pump) signature | 323 | 339 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi07g00437 | 689 | PRINTS | H+-transporting ATPase (proton pump) signature | 351 | 367 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi07g00437 | 689 | PRINTS | H+-transporting ATPase (proton pump) signature | 208 | 226 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi07g00437 | 689 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 326 | 439 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lsi07g00437 | 689 | PANTHER | ATPASE 9, PLASMA MEMBRANE-TYPE | 169 | 685 | - | - | |
Lsi07g00437 | 689 | PANTHER | ATPASE 9, PLASMA MEMBRANE-TYPE | 134 | 170 | - | - | |
Lsi07g00437 | 689 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 169 | 685 | - | - | |
Lsi07g00437 | 689 | Gene3D | - | 663 | 688 | - | - | |
Lsi07g00437 | 689 | PRINTS | P-type cation-transporting ATPase superfamily signature | 374 | 386 | - | - | |
Lsi07g00437 | 689 | PRINTS | P-type cation-transporting ATPase superfamily signature | 268 | 278 | - | - | |
Lsi07g00437 | 689 | PRINTS | P-type cation-transporting ATPase superfamily signature | 246 | 257 | - | - | |
Lsi07g00437 | 689 | PRINTS | P-type cation-transporting ATPase superfamily signature | 351 | 370 | - | - | |
Lsi07g00437 | 689 | Gene3D | - | 167 | 257 | IPR023299 | GO:0000166 | |
Lsi07g00437 | 689 | PANTHER | ATPASE 9, PLASMA MEMBRANE-TYPE | 4 | 135 | - | - | |
Lsi07g00437 | 689 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 170 | 254 | IPR023299 | GO:0000166 | |
Lsi07g00437 | 689 | Pfam | haloacid dehalogenase-like hydrolase | 166 | 365 | - | - | |
Lsi07g00437 | 689 | Pfam | Cation transporter/ATPase, N-terminus | 19 | 81 | IPR004014 | - | |
Lsi07g00437 | 689 | Gene3D | - | 353 | 609 | - | - | |
Lsi07g00437 | 689 | Gene3D | - | 66 | 140 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g00322 | Lsi-Chr2:2742661 | Lsi07g00437 | Lsi-Chr7:4655089 | 0 | dispersed | |
Lsi02g01502 | Lsi-Chr2:20847413 | Lsi07g00437 | Lsi-Chr7:4655089 | 0 | dispersed | |
Lsi06g01045 | Lsi-Chr6:20654344 | Lsi07g00437 | Lsi-Chr7:4655089 | 0 | dispersed | |
Lsi06g01491 | Lsi-Chr6:25366643 | Lsi07g00437 | Lsi-Chr7:4655089 | 0 | dispersed | |
Lsi07g00437 | Lsi-Chr7:4655089 | Lsi08g01132 | Lsi-Chr8:19941870 | 0 | dispersed | |
Lsi07g00437 | Lsi-Chr7:4655089 | Lsi11g00377 | Lsi-Chr11:3879425 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g00437 | K01535 | - | csv:101212751 | 971.844 |