Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00662 ATGGAGCCGTCTCTTGAACTTTCAGAAACCCCCGAGCAGATTATACTACGATGGGACTCCGCCGCACCGGAGGAGGTGAAGGATAAGATGATTTTTGACTCCGACAGGGAAGAGATCGACCGTTACTTGCAGGCCGTTGATGAAATCCAGAGGTCCATGTCGTCTGCTTCCATTTCGGACGATCAGAACAAAGTCGATTCAACTATGCAGATCGCCATGGCTAGGCTTGAGGATGAGTTCCGTCACATTCTCTCCAGTCATACTACTCCGATCGAGGTCGAGTCGCTTACTGATCCGAGTCCCTCTTCTCGTTCCATGTCCAATAGTGGGAGTGGTGTGTTTGAGGATGAAAACGATGAGGAACCGGAGTTACAGGAAGTTCAGCTCGATTTAAGTGGCAGTCCAAGTTTTGGGTCGAGTGGTCGATCGAGCTATCGGGCGACGAGCAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGGTTATCGATCTACGAAGTATTGCTGAACGGATGATATCGGCGGGGTACCTGCGCGAGTGCATCCAAGTTTATGGCAGTGTGCGAAAGTCCACCTTCGATTCCAGCTTCCGACGGCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGATTGGAATGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCAGCAAAGGTTTCTATTAGGACTTTGTTTTCCAGCGAGAAGAAGCTCTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAAGGTCCTGTGACTCAGTTGTTCAATTTCGCCGAAGCGATCAGCATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGAGTTGATACCTGACATTGATGTGATATTCGATTCAAAATCCGCGGAGTATATTCGAATTCAGGCGGCGGAGATATTGTCGAGGCTGGCGGAGGCCGTCCGAGGGACTTTATCAGAGTTTGAAAATGCGGTGCTGCGGGAGCCGTCGACGCATCCGGTTCCCGGCGGGACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGACTTCGGTGAGCTAGAGGGCAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGATTCTGCAATTCAATTTGGAGGGGAAGTCCAGGCACTACAAAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCATAAGATAAAAGGATCCCCAGAGTTGCGAGAAATGATCGGAGACGTTTATCTGAAAAGGCTGACCGGGAAGTTTCGACAGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGCGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGTCTTATTAGAGATAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTACGCATATCCATAACCGAGAAGTTGATCCCAGCTTACAGGTCGTTCCTTGGGCTTCATGGCCATCACATAGAGAGTGGAAAACACCCAGAAAATTACATGAAGTACACGGTGGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 49.37 MEPSLELSETPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSASISDDQNKVDSTMQIAMARLEDEFRHILSSHTTPIEVESLTDPSPSSRSMSNSGSGVFEDENDEEPELQEVQLDLSGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDALTELIPDIDVIFDSKSAEYIRIQAAEILSRLAEAVRGTLSEFENAVLREPSTHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVHKIKGSPELREMIGDVYLKRLTGKFRQAATNYERTTWVNVLYCLRNEGLNAGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYMKYTVEELENAILDFFEGCSVTHNLRRRSH 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7101373 7103205 + Lsi07G006620.1 Lsi07g00662 667084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00662 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 609 IPR004140 GO:0000145|GO:0006887
Lsi07g00662 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 7 609 - -
Lsi07g00662 610 Gene3D Exocyst complex component Exo70 14 606 - -
Lsi07g00662 610 MobiDBLite consensus disorder prediction 87 124 - -
Lsi07g00662 610 MobiDBLite consensus disorder prediction 88 113 - -
Lsi07g00662 610 Pfam Exo70 exocyst complex subunit 224 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lsi07g00662 610 SUPERFAMILY Cullin repeat-like 11 597 IPR016159 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi02g02843 Lsi07g00662 CCT
Lsi02g02843 Lsi07g00662 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g02079 Lsi-Chr3:32073809 Lsi07g00662 Lsi-Chr7:7101373 2.74E-99 dispersed
Lsi04g00159 Lsi-Chr4:1783319 Lsi07g00662 Lsi-Chr7:7101373 7.06E-113 dispersed
Lsi04g00846 Lsi-Chr4:8234422 Lsi07g00662 Lsi-Chr7:7101373 4.82E-96 dispersed
Lsi07g00662 Lsi-Chr7:7101373 Lsi07g00994 Lsi-Chr7:13795587 2.61E-117 dispersed
Lsi07g00662 Lsi-Chr7:7101373 Lsi10g01339 Lsi-Chr10:17641018 3.69E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00662 K07195 - csv:101204229 1120.53