Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00767 ATGCAGGACGTCGGAGACGAAGCGCGTAGGGCCCACAACGACAAGATTCGTCATTCCATTTCCTGTCCGCTGTTGTCTGGGAAGAAGATGGCCAGTGAAAACTTTGGGTTATGGCTATTTTTTGTTGCTTCTCTACAGTTTTTCCTTAAAGCTCAGTGTATTAATGTGGGGATTACTTATGTTCAAGATGCTGGTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGGGTTGGCTCGGGGATCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGCCTCCAACGCAGGGACACTCGTTTAGGCTCGTCTAGGAAAATGGTAACCGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAGAAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTTACCGGAGATGTTGAAGCCGTTGATCCCGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATCGATAACCTACTCGCTAAGGGAATGAAGAATGCGAAAAACGCTATTCTGTCGGGTTGTTCGGCGGGTGGATTAAGTTCCATTTTGCATTGTGATAACTTCAAATCTCTACTTCCTCCTACTACTAAAGTGAAGTGCCTCTCAGATGCAGGATACTTTATCAATGCGAAAGATGTCTCTGGAGCACAGCACATCGAAGACTTCTACAGCGACGTAGTTGCCACCCATGGTTCTGCCAAGAATTTGCCTATATCATGCACATCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAATGCAGCCTATGATTCATGGCAGATAAAGAATATACTGGCACCTGGTGTTGCTGATCCACACGGTACTTGGCACGACTGCAAGCTCGACATCAAAAACTGCTCGCCCATTCAGATTCGAGTCATGCAAGATTTCAGGGTTCAGTTCTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCAAGAGGGCTGTTCATAGATTCTTGCTATGCTCATTGCCAAACCGAAATGCAGGAGACGTGGTTACGAGCGGATTCTCCCATGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTTCGACAGGAGTCCGTTCCAGAAGATCGACTGTCCTTACCCGTGCAACCCGACATGCCACAACCGTATTTTCGAAGCAAAAGACAACCTCGAATGA 1284 45.4 MQDVGDEARRAHNDKIRHSISCPLLSGKKMASENFGLWLFFVASLQFFLKAQCINVGITYVQDAGIKGAVCLDGSPPAYHFSDGVGSGIDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSRKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIIDNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEDFYSDVVATHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQIRVMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRADSPMLSKTPIAKAVGDWFFDRSPFQKIDCPYPCNPTCHNRIFEAKDNLE 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8365706 8370095 + Lsi07G007670.1 Lsi07g00767 667189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00767 427 Pfam Pectinacetylesterase 51 401 IPR004963 GO:0016787
Lsi07g00767 427 PANTHER PECTIN ACETYLESTERASE 36 420 - -
Lsi07g00767 427 PANTHER NOTUM-RELATED 36 420 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g00012 Lsi-Chr6:123755 Lsi07g00767 Lsi-Chr7:8365706 2.91E-156 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00767 K19882 - csv:101214431 798.119