Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00776 ATGGTTTCTAGCCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCTCATCTCTTTAAGCCTACATTTCCAGCTAGTAAAGAGAGGATGTTGGGCAAAAATGCTATCTTCTTTCATCAAGGTGATTACCATGCTAAATTGAGACGACTCGTTCTTCGAACTTTCATGCCTGAGGCGATTAGAAACATCGTCCCGAGCATCGAATCCATCGCTAAAAACACCGTTCAATCATGGGATGGACAATTGATCAACACCTTCCAAGAAATGAAGATGTTCGCATTCGAGGTTTCGTTACTTTCGATATTTGGAAAAGACGAAGCTCTTTACTTCGAAGACCTCAAGCGATGCTACTACATTCTCGAAAAAGGATACAATTCGATGCCGATAAACCTGCCCGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAAGAGCTAGCACATATCTTAAACAAGATCCTGTCAACCAGGAGAGAAATGAAGCGCGACCACAACGACCTCCTCGGATCTTTCATGGGTGAAAAGGAAGGGCTCACCGATGAACAAATTGCCGATAACGTCATCGGTCTTATCTTTGCTGCTCGGGACACGACCGCAAGTGTTCTAACATGGATCTTGAAGTACCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATAATGAAAGAAAAACAGAGTGGAGATGATAATCTAACCTGGGCTGACACCAAAAATATGCCAATCACTTCAAGGGTGATTCAAGAAACTCTAAGAGTAGCTTCAGTTTTATCATTTACTTTCAGAGAAGCAGTAGAAGATGTTGAATTTGATGGATATTTGATTCCAAAAGGATGGAAAGTTTTGCCTCTTTTCAGAAATATTCATCACAGCCCAGAAATTTTCCCTCAGCCTGACAAATTTGATCCTTCAAGATTTGAGGTTGCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGGACCCACTCCTGTCCAGGAAATGAATTGGCCAAGCTGGAGATGCTGGTTTTACTCCATCATTTAACCACTAAGTACAGGTGGAATGTAGTGGGTGCACAAGAAGGAATTCAATATGGTCCTTTTGCTCTTCCTCTCAATGGCCTTCCAATAAGAATCTCTCTCAAGAAATAA 1149 42.12 MVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPGTLFHKAMKARKELAHILNKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKEKQSGDDNLTWADTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPEIFPQPDKFDPSRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWNVVGAQEGIQYGPFALPLNGLPIRISLKK 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8469411 8472171 - Lsi07G007760.1 Lsi07g00776 667198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00776 382 Pfam Cytochrome P450 2 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 Gene3D Cytochrome P450 1 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PANTHER ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 1 379 - -
Lsi07g00776 382 PRINTS E-class P450 group I signature 330 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS E-class P450 group I signature 289 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS E-class P450 group I signature 202 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS E-class P450 group I signature 182 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS E-class P450 group I signature 320 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS E-class P450 group I signature 249 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PANTHER CYTOCHROME P450 26 1 379 - -
Lsi07g00776 382 SUPERFAMILY Cytochrome P450 1 378 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS P450 superfamily signature 250 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS P450 superfamily signature 321 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS P450 superfamily signature 193 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g00776 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 323 332 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g00776 Lsi-Chr7:8469411 Lsi08g01473 Lsi-Chr8:22849026 3.12E-131 dispersed
Lsi07g00776 Lsi-Chr7:8469411 Lsi04g01563 Lsi-Chr4:23194296 1.17E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00776 K09843 - csv:101212508 738.028