Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00780 ATGGTGTTTGGGAAATTTAGGGATATCCTCTCGTCTGTAGCCACTCGTTGGTCGGGCTGCCATTCTTCTACAGATGCGTATAAGTCGTCATCGTCGCCTCCCTTGATCGCTTCTCCTTCTCCTCTTGTTGCCGGATTTGCTAGCCCTGCGCTTAAGAACAATCTAAGGCTTTCATCGTCTCTCCAGGATCTCACTACTTACCGTAGACTTGATCTTGAAGAGGGTAATCGCGGCGTTGAGAATGCTACTCCTGGTTTTTCACCACTCCAGCGAGAGAGTGCCGGCTCTAGTTTCTCAAAGGAGAAGACATTGCCTGGAGGCTCCTTCTGGTGGCTGAGCAGGAAGTGGGTGCGGACCATTGTTCTTTTTCTGTGTCTATTGCTCTTTTGTTTTCTAATTTATACGGTTTCTATGTATATTTATTCATATTGGTCCCAAGGAACACCCAGATACTATGTGGTTCTTGACTGTGGAAGTACTGGAACTCGAGCTTATGTATATCAAGCAAATGTTAATTATAATAAAAATGGAGCCCTTCCCATTGCCATCAGGTCATATACAGGACAAAAGAAGAAATTGAAGTCTCAGAGCGGACGGGCTTACGATCGAATGGAAACAGAACCTGGTCTTGATAAGTTGGTTCGTAATGTAACTGGTTTGAGGAAAGCTATTAAACCTCTGCTTCAGTGGGCTGAGAAGCAGATTCCGAAGCATGCCCACGAAAGCACCTCTCTTTTCCTTTATGCGACTGCCGGAGTTAGAAAGTTACCACCTGCAGATTCAAAATGGCTTCTGGACAATGCCTGGTCTATATTAAAGAGTTCGCGCTTTCTTTGCCAGAGAGAGTGGGTTAAAACCATTTCAGGTACAGAAGAGGCTTACTACGGCTGGATAGCCCTTAACTATCAAAAAGAATTGTTGGGGGCTACACCAAGGGAGCCAACATATGGGGCACTCGACTTGGGTGGCTCTTCTTTGCAAGTAACTTTTGAAAGTAAGGAACAAAATGATTCTAGTTTGAACATTAAAATTGGAAATGTTGATTATCATCTCAATGCATATTCTCTTACTGGCTATGGTTTAAATGATGCATTTGGGAAATCTGTTGTCCACTTATTAAGAAGGATCAAAGAACCTGAAAAGCTGGACCTGTCTAATGGAAAATTTAAACTTAACCACCCTTGCCTGCATTCTGGGTACAATGAGCAGTATACCTGTAACCAGTGTGGAAAATTATTGGGCAGAGGAGGTAATTCTGGAATTTCTCTAAGACTGATTGGTGCTCCAAATTGGGAAGAATGTTCTGCACTTGGTAAAGTTGCTGTAAATTTTTCTGAGTGGTCAAATACAAGCGCTGGAGTTGATTGTGATGTACAACCTTGTGCCATAACTAGTAACTACCCTCCACCATATGGAAATTTTTACGCCATTTCTGGTTTCTTTGTGGTATTTCGATTTTTCAATCTGACTTCAGAGGCTACACTTGATGATGTACTAGAAAAGGGCCACAAATTTTGTGAAAAACCTTGGGAAGTTGCACAGGCTAGTGTTCCTCCACAACCCTTTATTGAGCAATACTGCTTTAGGGCACCATACATTGTCTCACTCCTTAGAGAGGGGTTGCATATTACCGATAAACAAATTACTATTGGTTCTGGAAGTACAACTTGGACACTTGGGGTTTCACTGTTGGAAGCTGGAAAAGCATTTACAGTTACAACCAGGCTAGAGCTCCGTGGTAGTGCATTACCTAGATTTTTCCGGAGGCCATATCTCCCAATTTTCAGGCATAATGCTGTCTCCACCACATCTGTTCTAAACATTCCATCTCCTTTTCGGTTACAGCGATGGAGTCCGATGAGTGCTGGTGACGGTAGAGTCAAGATGCCACTGAGTCCAACAGTTAAAGGTTCTCAAGAAAGACCCTTTGGCTTAGTGCATGGCTTTGGCAGCGGCAGTGGCATCCAACTTATGGAGTCGTCATTGCACCGGTCAACAAGTAGTGGGGTTTCGCATAGTTATTCTTCAAATAGCCTTGGCCAAATGCAATTTGACAATGGGAGTGTCGGTTCCTTCTGGACCCCACGCCGAAGTCAGATGCGACTTCAAAGTAGACGATCACAATCTCGAGAGGATCTTTCTTCGACATTGCCCGAAATACACATGGTGAAGGTTTAG 2178 43.71 MVFGKFRDILSSVATRWSGCHSSTDAYKSSSSPPLIASPSPLVAGFASPALKNNLRLSSSLQDLTTYRRLDLEEGNRGVENATPGFSPLQRESAGSSFSKEKTLPGGSFWWLSRKWVRTIVLFLCLLLFCFLIYTVSMYIYSYWSQGTPRYYVVLDCGSTGTRAYVYQANVNYNKNGALPIAIRSYTGQKKKLKSQSGRAYDRMETEPGLDKLVRNVTGLRKAIKPLLQWAEKQIPKHAHESTSLFLYATAGVRKLPPADSKWLLDNAWSILKSSRFLCQREWVKTISGTEEAYYGWIALNYQKELLGATPREPTYGALDLGGSSLQVTFESKEQNDSSLNIKIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIKEPEKLDLSNGKFKLNHPCLHSGYNEQYTCNQCGKLLGRGGNSGISLRLIGAPNWEECSALGKVAVNFSEWSNTSAGVDCDVQPCAITSNYPPPYGNFYAISGFFVVFRFFNLTSEATLDDVLEKGHKFCEKPWEVAQASVPPQPFIEQYCFRAPYIVSLLREGLHITDKQITIGSGSTTWTLGVSLLEAGKAFTVTTRLELRGSALPRFFRRPYLPIFRHNAVSTTSVLNIPSPFRLQRWSPMSAGDGRVKMPLSPTVKGSQERPFGLVHGFGSGSGIQLMESSLHRSTSSGVSHSYSSNSLGQMQFDNGSVGSFWTPRRSQMRLQSRRSQSREDLSSTLPEIHMVKV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8588934 8592709 + Lsi07G007800.1 Lsi07g00780 667202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00780 725 MobiDBLite consensus disorder prediction 697 725 - -
Lsi07g00780 725 Gene3D - 142 289 - -
Lsi07g00780 725 Gene3D Exopolyphosphatase. Domain 2 290 552 - -
Lsi07g00780 725 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 84 683 IPR000407 GO:0016787
Lsi07g00780 725 PANTHER APYRASE 7-RELATED 84 683 - -
Lsi07g00780 725 MobiDBLite consensus disorder prediction 78 98 - -
Lsi07g00780 725 Pfam GDA1/CD39 (nucleoside phosphatase) family 149 565 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00388 Lsi-Chr2:3322247 Lsi07g00780 Lsi-Chr7:8588934 8.92E-86 dispersed
Lsi07g00780 Lsi-Chr7:8588934 Lsi11g00977 Lsi-Chr11:15899615 1.81E-19 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00780 - - csv:101219987 1333.93