Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g00790 | ATGGCGGCCACTTCCCTTTCGAACCTGCCTTCTGCTCTCTTCCATGGAAATCTGCAGAGAAATGAATTTGGGTTTGTGGGTATGCCGAGACAACCCACCAAGTATCTCAAATCCAATCATAGAGCTCCGGTTGTGAGATGTCAATCAACTGAAGTTGATGGACCGAAAACAAAAAGAAATCTACTCGACAATGCCAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGCCAATAGCTGAAGGTGCAGTCTCTGATTTGTTTAGCCGCCCACTCTTCTTTGCACTGTATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCTATTGTGGCAAGATATATTCTTCGTGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCAATAATGGGTAAAGGACTAATACCAGCTGATCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGACCAAAGTGTTCACTGATTGTTCAGAACGATCAATACTGAAATTGGAGAAGCTTCTTGGAGAAGGTGAACTTCAGGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCGAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCCCCAGTGATTAAGGCTGTGTATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATACTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAATTCCATAGTGACCTTAAGGTTATTAATGACTGTCTTGATGGACTAATACGAAATGCAAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAATTGCAGCAGAGGGACTATTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCCTAGTTGATATGCGGGGAGTTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCCGGGCACGAAACAACTGCTGCCGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAAGCTCAGGCAGAGATCGATTTGGTTCTTGGCAAGGGAAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATCCTTGCAGAGACTCTTCGTTTGTTTCCCCAGCCACCATTGCTAATAAGACGAGCACTCAAACCGGATACATTGCCAGGAGGATACAATGGTGACAAAAATGGGTATGCAATACCTGCAGGAACTGACATCTTCATCTCTGTTTACAACCTCCACAGATCTCCATACTTCTGGGAAAACCCTCAAGAATTTGAACCAGAGAGATTTCAAGTAAAGAGGGCAAGCGAGGGAATTGAAGGATGGGACGGTTACGACCCATCAAGAAGCCCTGGAGCTCTATACCCAAACGAGATTGTATCAGACTTTTCCTTCTTACCATTTGGTGGAGGACCTAGAAAATGTGTGGGGGATCAATTTGCTCTAATGGAGTCAACTATAGCACTGGCCATGTTACTGCAGAAGTTTGATGTGGAACTAAGAGGAAGTCCAGAATCTGTGGAACTTGTCACTGGGGCAACTATACATACCAAAAGACCAACAACTACAAGATTCTCAGAATCGCTTGCAAATTTTCATGGTAGGAAGAGAGCCTTAAGCAGAAATATACTTGTTAAGGACTCTTGGCAGGGCTTGGGATTATAA | 1803 | 42.71 | MAATSLSNLPSALFHGNLQRNEFGFVGMPRQPTKYLKSNHRAPVVRCQSTEVDGPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFSRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMTKVFTDCSERSILKLEKLLGEGELQEDKTIELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGKGRPTFELLKGLKYIRLILAETLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWENPQEFEPERFQVKRASEGIEGWDGYDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELRGSPESVELVTGATIHTKRPTTTRFSESLANFHGRKRALSRNILVKDSWQGLGL | 600 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8703121 | 8710547 | + | Lsi07G007900.1 | Lsi07g00790 | 667212 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g00790 | 600 | Pfam | Cytochrome P450 | 104 | 550 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | SUPERFAMILY | Cytochrome P450 | 92 | 571 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | E-class P450 group I signature | 104 | 123 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | E-class P450 group I signature | 364 | 390 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | E-class P450 group I signature | 511 | 521 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | E-class P450 group I signature | 521 | 544 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | E-class P450 group I signature | 344 | 361 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | P450 superfamily signature | 355 | 372 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | P450 superfamily signature | 521 | 532 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | P450 superfamily signature | 407 | 418 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PRINTS | P450 superfamily signature | 512 | 521 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 514 | 523 | IPR017972 | GO:0005506|GO:0016705 | |
Lsi07g00790 | 600 | PANTHER | CYTOCHROME P450 FAMILY 4 | 76 | 564 | - | - | |
Lsi07g00790 | 600 | Gene3D | Cytochrome P450 | 80 | 583 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lsi07g00790 | 600 | PANTHER | CYTOCHROME P450 97B3, CHLOROPLASTIC | 76 | 564 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi05g00806 | Lsi-Chr5:11988067 | Lsi07g00790 | Lsi-Chr7:8703121 | 4.46E-121 | dispersed | |
Lsi07g00790 | Lsi-Chr7:8703121 | Lsi06g00316 | Lsi-Chr6:3599628 | 1.09E-39 | dispersed | |
Lsi07g00790 | Lsi-Chr7:8703121 | Lsi03g00243 | Lsi-Chr3:3057964 | 3.55E-39 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g00790 | K24543 | - | csv:101210292 | 1034.25 |