Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00815 ATGTGTGGCATGGAGGCGGCGAAGATGAAGACGACAACAAAGACGAAGATGATGAAGTTGAGTTTGTTGATTGCAGTTCCAGTAATGGTGATTGTGATATCACAGCAATTTTGGATGCCATCTTTGGACTTTAATCATCTTTGGACAACTGTTTCTTACCATGGCTTCGACCAAAAATCCTGCTTAAGTCGATACCAACTAAACCTCTACAAAAAACTCTCTCCCTACAAACCTTCTTTCCCTCTCCTCTCAAAGCTCCGTCACTACGAAGTTCTCCATAGCCGATGTGGCCCTAATTCGCCATCTTTCCGTCGAGCCCTAGTTGGTCTTACCTCACCCACAAACTCCTCATCTTCATCGGACGATTGCAAATACCTCGTCGTTTTAACCCGCGACGGCCTCGGCAACCGAATCCTCGCCATTCTCTCCGCTTTCTTCTACGCCCTAATCTCCAATCGCGTCATTCTAATCGACCAAGGCAACACTCTTGATGATCTCTTTTGTGAACCCTTTCTTGGATCCTCGTGGCTTCTTCCCTCCGATTTCCCTCTCCGCCATAAATTTGGGTTGTTTCGCCAATCCTTCCCAGGGTCTTTTGGCAATATTTTGAGGAATGGGATGTTGAAGAAAACAATCGAAGATTCAGCTCCGCCTTATTTGTATCTCCATCTCTCTCATGACGCCAGCGATTACGATAAGCTATTTTACTGCGACCGACAACAGAATCTTCTGAAGAAGGTCCCATGGCTGATTATGGAGACCAATAACTACCTAGTTCCAGGAATTTTTCTAGTTTCTTCTTTCAAAGAAGAGCTTAATAAACTCTTTCCAGCGAAGGACACTGTGTTTCACCATCTCGGACGGTACCTCTTCCACCCAACGAACGATGTCTGGGGGCTAATATTGAGATCTTACAAGCCGTATGTCGCCAGAGCAAACGAAATGATTGGGATTCAGATCCGAATTTTTGGGTCAGAATCTGGGTCAATTCAGGACCAAATGGATCAGCTTCTAGCTTGCACACAAAAGAAGAAATTACTACCAGAGGTCAAACCATTATCGCCAGAGAAGATGAATTCCACTTCTCAGAAGGTGAAAGTTGTGCTAGTGACATCTCTAAGCTCTCAATACTCAGAAACCCTAAAGGAGATGTATTGGGAGCATCCGACCGTCGACGGTGAGGTGGTGGCAGTGTACCAGCCGAGCCATGAGGGGATTCAAAGCTCCGATAGTAGGATGCACAACCGAAAGGCATTGGCGGAGATGTACCTTTTGAGCTTGAGCGATGTGTTGGTGACAAGCGATTGGTCGACATTTGGATATGTGGCACAGGGGTTGGCTGGAGTGAAGCCATGGATGCTTTACAAGGCAGAGGATAAGGTGTTTTGGGCGTTACAACATTGGCTAAAGTACAGAACGAGGAATGAGACGACTGGCGATTGGCCATGTCGGCAGGCAGTGTCGATGGAGCCCTGCCTCCACGGACCGCCAGTGTGCGATTGCGATGAGATGAAAAGAATGGATGCAGGAAAT 1533 46.9 MCGMEAAKMKTTTKTKMMKLSLLIAVPVMVIVISQQFWMPSLDFNHLWTTVSYHGFDQKSCLSRYQLNLYKKLSPYKPSFPLLSKLRHYEVLHSRCGPNSPSFRRALVGLTSPTNSSSSSDDCKYLVVLTRDGLGNRILAILSAFFYALISNRVILIDQGNTLDDLFCEPFLGSSWLLPSDFPLRHKFGLFRQSFPGSFGNILRNGMLKKTIEDSAPPYLYLHLSHDASDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLVSSFKEELNKLFPAKDTVFHHLGRYLFHPTNDVWGLILRSYKPYVARANEMIGIQIRIFGSESGSIQDQMDQLLACTQKKKLLPEVKPLSPEKMNSTSQKVKVVLVTSLSSQYSETLKEMYWEHPTVDGEVVAVYQPSHEGIQSSDSRMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEDKVFWALQHWLKYRTRNETTGDWPCRQAVSMEPCLHGPPVCDCDEMKRMDAGN 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9089321 9096543 + Lsi07G008150.1 Lsi07g00815 667237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00815 511 Pfam Xyloglucan fucosyltransferase 54 501 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lsi07g00815 511 PANTHER FUCOSYLTRANSFERASE 2-RELATED 465 510 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lsi07g00815 511 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 460 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lsi07g00815 511 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 465 510 - -
Lsi07g00815 511 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 46 460 - -
Lsi07g00815 511 Gene3D - 120 169 - -
Lsi07g00815 511 Gene3D - 304 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g00086 Lsi-Chr2:722278 Lsi07g00815 Lsi-Chr7:9089321 4.59E-164 dispersed
Lsi04g00398 Lsi-Chr4:3907188 Lsi07g00815 Lsi-Chr7:9089321 1.24E-177 dispersed
Lsi07g00813 Lsi-Chr7:9074230 Lsi07g00815 Lsi-Chr7:9089321 1.20E-146 proximal
Lsi07g00814 Lsi-Chr7:9086520 Lsi07g00815 Lsi-Chr7:9089321 9.52E-24 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00815 K13681 - csv:101222105 845.499