Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g00834 | ATGGCGGACGAAGTGAAGATGTTGGATTTTTGGCCCAGCATGTTTGGAATGCGAGTCAGAGTAGCTCTGGCTCTGAAGGGCGTGGCGTATGAATATGTGGATGAAGATCTGAGGAACAAGAGCCCTTTACTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATTATTGTTGAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTGCCGTCTGATCCTTATCAGAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGCTGGAAGGAAAATTTGGACGAGCAAAGGAGAAGAGCAAGAAGAAAGTAAGATGGAGGTAATAGGAATATTGAAGCAAATGGAAGAAGTAATAATTGGGGAAAAGGGTTACTTTGGAGGTGAGTGTTTGGGATATTTAGACATTGTTTTGATTGGATACTACACTTGGTTTTATGCCTATGAGACAATTGGGAACTTTAGCATTGAGGCTGAATGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTTCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGTGATTTTGTGCTTCAAATGAAGACAAAGTATGGCCTTGGCTAA | 663 | 40.57 | MADEVKMLDFWPSMFGMRVRVALALKGVAYEYVDEDLRNKSPLLLQMNPIHKKIPVLVHNGKPICESSIIVEYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKLFDAGRKIWTSKGEEQEESKMEVIGILKQMEEVIIGEKGYFGGECLGYLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVSKSLPDPKKVCDFVLQMKTKYGLG | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9325883 | 9327119 | - | Lsi07G008340.1 | Lsi07g00834 | 667256 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g00834 | 220 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 217 | IPR010987 | - | |
Lsi07g00834 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 211 | IPR045073 | - | |
Lsi07g00834 | 220 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Lsi07g00834 | 220 | SFLD | Glutathione Transferase (cytosolic) | 2 | 217 | IPR040079 | - | |
Lsi07g00834 | 220 | Pfam | Glutathione S-transferase, C-terminal domain | 128 | 189 | - | - | |
Lsi07g00834 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 4 | 211 | - | - | |
Lsi07g00834 | 220 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
Lsi07g00834 | 220 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Lsi07g00834 | 220 | CDD | GST_C_Tau | 89 | 213 | IPR045074 | GO:0004364|GO:0006749 | |
Lsi07g00834 | 220 | SUPERFAMILY | GST C-terminal domain-like | 76 | 217 | IPR036282 | - | |
Lsi07g00834 | 220 | Gene3D | - | 88 | 220 | - | - | |
Lsi07g00834 | 220 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Lsi07g00834 | 220 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Lsi07g00834 | 220 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi02g00069 | Lsi-Chr2:589600 | Lsi07g00834 | Lsi-Chr7:9325883 | 8.82E-24 | dispersed | |
Lsi07g00834 | Lsi-Chr7:9325883 | Lsi07g00840 | Lsi-Chr7:9392594 | 2.89E-131 | dispersed | |
Lsi07g00836 | Lsi-Chr7:9337219 | Lsi07g00834 | Lsi-Chr7:9325883 | 5.69E-57 | dispersed | |
Lsi07g00833 | Lsi-Chr7:9303739 | Lsi07g00834 | Lsi-Chr7:9325883 | 1.24E-71 | tandem | |
Lsi07g00834 | Lsi-Chr7:9325883 | Lsi07g00835 | Lsi-Chr7:9331765 | 1.64E-122 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g00834 | K00799 | - | csv:101217848 | 407.142 |