Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi07g00837 | ATGGCAGATGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTTGGGATGCGAGTGAGAATAGCCCTTGCAGAAAAAGGTGTGGCTTATGAGTATGTGGAAGAAGATCTGAGGAATAAAAGCTCTTTGCTTCTTCAAATGAATCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCAATAATTGTTGAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTTTGTTGCCGTCTGATCCTTATGAAAGAGCTCAAGCCAGATTTTGGGTGGATTTCGTCGACAAGAAGGATTCCCTTGACCTAATCCCTTTCCATCTAAGGTTTCTCTGTTTTCCTTCTCCGTTTGGGCCTTTTCTTGAACCAAGGTTTATTCCAGTCCAAACTTGGCCCGACCGTGGACGAGCCGAGGCCAAGCCCCCTGTCATGGGCTTTGGCCTGGGCCATCTTTTCCCTGACCCATTTTAA | 492 | 44.31 | MADEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVEYIDEVWKDKAPLLPSDPYERAQARFWVDFVDKKDSLDLIPFHLRFLCFPSPFGPFLEPRFIPVQTWPDRGRAEAKPPVMGFGLGHLFPDPF | 163 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 9342227 | 9344664 | - | Lsi07G008370.1 | Lsi07g00837 | 667259 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi07g00837 | 163 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
| Lsi07g00837 | 163 | Gene3D | - | 85 | 119 | - | - | |
| Lsi07g00837 | 163 | PANTHER | GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN | 4 | 105 | - | - | |
| Lsi07g00837 | 163 | SUPERFAMILY | Thioredoxin-like | 5 | 104 | IPR036249 | - | |
| Lsi07g00837 | 163 | CDD | GST_N_Tau | 5 | 78 | - | - | |
| Lsi07g00837 | 163 | SFLD | Main.3: Omega- and Tau-like | 2 | 105 | IPR045073 | - | |
| Lsi07g00837 | 163 | SFLD | Glutathione Transferase (cytosolic) | 2 | 105 | IPR040079 | - | |
| Lsi07g00837 | 163 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
| Lsi07g00837 | 163 | Gene3D | Glutaredoxin | 1 | 84 | - | - | |
| Lsi07g00837 | 163 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 105 | IPR045073 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi07g00837 | Lsi-Chr7:9342227 | Lsi07g00840 | Lsi-Chr7:9392594 | 1.08E-70 | dispersed | |
| Lsi07g00837 | Lsi-Chr7:9342227 | Lsi07g00838 | Lsi-Chr7:9361646 | 1.26E-65 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi07g00837 | K00799 | - | pvy:116115024 | 203.371 |