Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g00838 | ATGGCAGAGGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTTGGTATGCGAGTTAGAGTAGCCCTTGCAGAGAAGGGTGTGGCTTATGAGTATTTGGAAGAAGATCTGAAAAATAAGAGTCCTTTGCTTCTTCAAATGAACCCAATTAACGAGAAGGTCCCTGTTCTTATTCATAATGGAAAACCCATTTGTGAATCTTCAATAATTGTTGAGTATATTGATGAAGTTTGGAAGGATAAATCTCCTTTGTTGCCGTCTGATCCTTATCAAAGAGCTCAGGCCAGATTTTGGGCGGATTTCGTCGATAAGAAGCAATTGGAAGAAGTTCTTGGAGATAAGGCTTACTTTGGAGGTGAAAGTTTGGGATTTGTTGACATTGTTTTGATTGGATTCTACAGTTGGTTTTATGCCCTTGAGACCCTTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAGTAGGTTGGGGGAAGAGATGCTTGCAAAAAGAGAGTGTTTCTAAGTCCCTACCTGACCCAAAAAAGGTCTATTGTGACTATGTGGTTCCATGCAGAAACCTTTGGGGCTTTGACCAAACAAACTGA | 588 | 41.5 | MAEEVKLLDFWPSMFGMRVRVALAEKGVAYEYLEEDLKNKSPLLLQMNPINEKVPVLIHNGKPICESSIIVEYIDEVWKDKSPLLPSDPYQRAQARFWADFVDKKQLEEVLGDKAYFGGESLGFVDIVLIGFYSWFYALETLGNFSIESECPKIVGWGKRCLQKESVSKSLPDPKKVYCDYVVPCRNLWGFDQTN | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9361646 | 9363714 | - | Lsi07G008380.1 | Lsi07g00838 | 667260 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g00838 | 195 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 22 | 191 | IPR010987 | - | |
Lsi07g00838 | 195 | SFLD | Main (cytGST) | 2 | 105 | - | - | |
Lsi07g00838 | 195 | Pfam | Glutathione S-transferase, C-terminal domain | 106 | 157 | - | - | |
Lsi07g00838 | 195 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 105 | 178 | - | - | |
Lsi07g00838 | 195 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Lsi07g00838 | 195 | SUPERFAMILY | GST C-terminal domain-like | 76 | 178 | IPR036282 | - | |
Lsi07g00838 | 195 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Lsi07g00838 | 195 | Gene3D | - | 108 | 191 | - | - | |
Lsi07g00838 | 195 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 106 | IPR045073 | - | |
Lsi07g00838 | 195 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 105 | 178 | IPR045073 | - | |
Lsi07g00838 | 195 | SFLD | Main.3: Omega- and Tau-like | 2 | 105 | IPR045073 | - | |
Lsi07g00838 | 195 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 4 | 106 | - | - | |
Lsi07g00838 | 195 | CDD | GST_C_Tau | 89 | 178 | IPR045074 | GO:0004364|GO:0006749 | |
Lsi07g00838 | 195 | Gene3D | - | 85 | 107 | - | - | |
Lsi07g00838 | 195 | Gene3D | Glutaredoxin | 1 | 84 | - | - | |
Lsi07g00838 | 195 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Lsi07g00838 | 195 | SUPERFAMILY | Thioredoxin-like | 5 | 105 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi07g00838 | Lsi-Chr7:9361646 | Lsi07g00840 | Lsi-Chr7:9392594 | 4.17E-113 | dispersed | |
Lsi07g00837 | Lsi-Chr7:9342227 | Lsi07g00838 | Lsi-Chr7:9361646 | 1.26E-65 | tandem | |
Lsi07g00838 | Lsi-Chr7:9361646 | Lsi07g00839 | Lsi-Chr7:9389835 | 4.57E-69 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g00838 | K00799 | - | csv:101218562 | 306.219 |