Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00892 ATGGCGCTTAAAGTCTATGCAGATCGAATGTCACAGCCATCTCGCGCCGTCCTCATCTTCTGCAAGGTTAACGGGATTGCTTTTGAGGAGGTGGGAGTAGCCTTGTCCAAACTCCAACAGCTAACTCCCGAATTCAAAGAGGTCAACCCAATGGCAAAGGTTCCAGCCATTGTTGATGGAAGATTTAAGCTGTTCGAGAGTCATGCTATTCTTATCTACCTTTCTTGTGCGTTTCCTGGTGTCGCAGATCACTGGAGGGCTAAAATAAATTCAGTACTGGATTGGCATCATTCTAATTTACGTAGTGGTGCAGCTCCTTTTGTATTCAATACTGTTCTAGCACCTTTGTTTGGCCGTAGTTCGAATCCTCAAGCAGCTGCTGAAGCTGAGATGCTTTTATCCAAGTCACTTTTGAAAATAGAGTCGTTTTGGCTGAAGGGGAATGGGAAGTTTTTGCTAGGTGGCCTTAAACCATCCATAGCTGATCTTAGCCTGGTTTGTGAAATTATGCAACTAGAGCTTTTGGACGAGAAGGATCGCAATCGTATTCTGGGTCCGCACCAGAAAGTGAGGGAGTGGGTTGAGAATACAAGAAATGCTACAAACCCGCATTTTGATGAGATTCATAAGCTTCTCTTCAAGCTCAAGGAAACCCTTCAAAAGCGGCGCTCAGAGAACTTGACTTCAAAGATGTGA 696 44.68 MALKVYADRMSQPSRAVLIFCKVNGIAFEEVGVALSKLQQLTPEFKEVNPMAKVPAIVDGRFKLFESHAILIYLSCAFPGVADHWRAKINSVLDWHHSNLRSGAAPFVFNTVLAPLFGRSSNPQAAAEAEMLLSKSLLKIESFWLKGNGKFLLGGLKPSIADLSLVCEIMQLELLDEKDRNRILGPHQKVREWVENTRNATNPHFDEIHKLLFKLKETLQKRRSENLTSKM 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10208318 10211750 + Lsi07G008920.1 Lsi07g00892 667314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00892 231 SUPERFAMILY Thioredoxin-like 2 79 IPR036249 -
Lsi07g00892 231 SFLD Main (cytGST) 3 198 - -
Lsi07g00892 231 Gene3D Glutaredoxin 1 82 - -
Lsi07g00892 231 Gene3D - 83 231 - -
Lsi07g00892 231 SUPERFAMILY GST C-terminal domain-like 86 208 IPR036282 -
Lsi07g00892 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Lsi07g00892 231 CDD GST_N_Theta 3 78 IPR040075 -
Lsi07g00892 231 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 226 IPR043377 -
Lsi07g00892 231 SFLD Glutathione Transferase (cytosolic) 3 198 IPR040079 -
Lsi07g00892 231 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Lsi07g00892 231 CDD GST_C_Theta 86 215 IPR040077 -
Lsi07g00892 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 82 218 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g00892 Lsi-Chr7:10208318 Lsi08g01285 Lsi-Chr8:21216527 2.29E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00892 K00799 - csv:101211608 394.045