Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00919 ATGGCTTCGAATGCTACGGCAGTGACCATATGTGCAACTCCTATGAAAGCAACATCAAACGGCATATTTCAAGGCGATAATCCTCTTGATTTCGCTCTCCCTCTTGTCATTCTGCAGATATGTTTGGTAGTCGCACTTACTCGTGGTCTTGCCTTTCTTTTGAGGCCATTAAAACAGCCACGGGTGATTGGAGAAATTATTGGAGGAATACTTTTAGGTCCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACGATATTTCCATCCAATAGTATCACAGTGTTAGATACCATAGCAAACATTGGATTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCCTTGGCATTGCCATTACTGGGATTTGCGTTCCCTTTGCATTAGGAATTGGGTCATCATTTGTCCTCCGAGAAACCATATCAAAAGGTGTAAATGCATCCGCGTTTCTTATATTCATGGGTGTTGCACTTTCAATAACAGCCTTTCCTGTCTTAGCTCGCATTCTTGCCGAGCTTAAACTACTGACGACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTAAATGATGTAGCTGCCTGGATTCTTCTTGCTCTTGCCATTGCATTATCTGGTTCTGATAAATCTCCCCTAACTGCAGTTTGGGTCCTTTTATCTGGCTGCGGCTTTGTTGTGGCTGCTATTGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCTGTACGGGAAATCTACATATGCGCCACATTAGTTATCGTCCTAGCTGCTGGATTTGTCACGGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCAAAGGATGGACCATTAGTAGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTTTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATAGTCACCGCCTGTTCTGGAAAAATCCTTGGCACTTTTCTGGTGTCCCTTCTTTGTAAAATACCAGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCGGCAAGGAGGGCCAAATTAGCCAATTATAAACATAGGAAAATCGAACGGAAAAACAAGAATACACAGCTTCGGATGTTGACCTGTTTCCATAGTGCAGGAAATGTTCCATCAATTATAAATCTGCTCGAGGCCTCGAGAGGAATTGAGAAGGGAGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGAGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAATAAGGGCCAGAGGTCGGATTCCAACCATGTTATTGTCGCGTTTGAAGCTTACCAACAACTGAGCAGAGTATTCATCCGACCGATGACGGCCATTTCCTCCATGTCTGATATACATGAAGATATTTGCGCCACTGCTGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCAGAGGGTGGATGGTTCACTGGAGACTACTCGAAGCAGCATCCGTGTTGTTAATCAGAATGTCCTCGAGCATGCTCAATGTTCAGTTGGAATTTTTGTTGATCGTGGGTTGGGTGGAACAACCCATGTTTCATCGAGCAACGTTTCACTTTTCATCACTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCACTTTCTTATGGAGTTCGTATGGCCGAGCACCCTGGCATTAGATTGATGGTTATTCGTTTCTTCGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTTGGGATTTCTTCTGTGAAAGTTTCTCAGGATGATGAATTTCTTTCCGAGTTCAAGCACAATAAGAGCAAGAACGATTCCGTCATATATGTAGAGAAAACCATAAAAAGTGTTGCAGAAGCAATGGATACTGTGCAAGATCTGAAAAACTGCAATCTATATCTTGTTGGTCGAACACCACTGGATGTCCAATCAACCTTTGTCTCAAACAGAAGCGACTGTCTGGAGCTTGGTCCAGTTGGGAATCTGTTGACTTCACCGAACTTCCCGATTACAGCTTCGGTTTTGGTAGTGCAGCAATATCGTTCCGAGTTACCGTTGAATTCAGCTTCAGATTCTGCTGATGGAGAATCAGAATCAGCATAG 2400 42.88 MASNATAVTICATPMKATSNGIFQGDNPLDFALPLVILQICLVVALTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSITVLDTIANIGLLFFLFLVGLELDLKSIRRTGKKALGIAITGICVPFALGIGSSFVLRETISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCGFVVAAIVILSPVFKWMTKQCFQGEPVREIYICATLVIVLAAGFVTDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKILGTFLVSLLCKIPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARRAKLANYKHRKIERKNKNTQLRMLTCFHSAGNVPSIINLLEASRGIEKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSRVFIRPMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTRSSIRVVNQNVLEHAQCSVGIFVDRGLGGTTHVSSSNVSLFITVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGISSVKVSQDDEFLSEFKHNKSKNDSVIYVEKTIKSVAEAMDTVQDLKNCNLYLVGRTPLDVQSTFVSNRSDCLELGPVGNLLTSPNFPITASVLVVQQYRSELPLNSASDSADGESESA 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10797643 10801855 - Lsi07G009190.1 Lsi07g00919 667341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00919 799 Gene3D - 35 440 IPR038770 -
Lsi07g00919 799 PANTHER CATION/H + ANTIPORTER 7 792 - -
Lsi07g00919 799 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lsi07g00919 799 PANTHER CATION/H(+) ANTIPORTER 18 7 792 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g00919 Lsi-Chr7:10797643 Lsi07g00923 Lsi-Chr7:10948797 0 dispersed
Lsi07g00919 Lsi-Chr7:10797643 Lsi07g00921 Lsi-Chr7:10837487 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00919 - - csv:101223205 1397.1