Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00985 ATGACACGTGAGGGTGGACGCTGGTCGGTGGGTTTGGTTTCTACTGGCCGGAAAAAAGGAGACGAAGCTTCTAGCCACCATTCTCATCTAATCTATTACATGAAATTCAAAAGAATGGCCGCCCTTTCCATCGATCCAAGGCTCAAACTCCAAATGCCCAAACTCCGAATTCAAAATGAAGCCACAGCAGAAGAGATTGAAGGGCTCATTCGAGTATACGCAGATGGGCGTGTTGAAAGGCCCCCAATCATCCCAAATGTATCCTGCAGCACCACAGCATCAGACAAAGGCGTAACTGCAAAAGATGTTCTCATAGACAATTTCACAAACACCTGGGCGCGAATTTACGTTGCCAACTCTCAACGAAACCTCCCCTTACTTGTTTATTTCCATGGCGGTGGCTTTTGTGTTGGTTCTGCCGCCTGGAGCTGTTACCATGAATTCCTCCTCGACCTTGCTTCCAAAGCAAAATGTGTAATCCTCTCAGTCAACTATCGTCTTTCCCCTGAACATCGCCTCCCCGCCGCTTACGAAGACGGATTCAACACAATCATGTGGTTGAAAAAACATGCAATAACCAACCCAATCGAACACAAATGGTGGTTAGGCAATTGCAATCCATCAAAATTGTTCCTCGCCGGCGATAGCGCCGGAGCAAACATAGCGTACAACATCGTCGCACGGCTAGGGCTCAACGAACCCACAATCCTAAAACCCCTAACCCTAAAGGGCATAATCCTGATCCAACCTTTCTTTGGCGGAGAATCGCGAACCAAATCAGAAAAGCTCGCCGCTCAGCCCTCTTCCGCCTCCGCATTAACTCTCGACGCCGCCGACACATACTGGCGACTGTCCCTGCCACCGGGGGCCAATCGCGACCATTCATGGAGCAATCCGCTGATGAATGGCGGGGCAAAGTTAAGAGAAACGAAGGTCCCACCGTTAATGGTGTGCATATCGGAGTTGGACATACTGGTAGACAGAAACTTGGAGTTCTGTGCAGCCATGGCAGCCGCCGGGAAGCAAGTGGAGAGAGTGATTTTGAAAGGAGTTGGACATAGCTTTCAAATTCTGAATAAAGACCAGATTTCTTGTGTGCGAAGACGAGAAATGATGGGTTGTATTCAGGCTTTTATTCAACAATAG 1146 48.78 MTREGGRWSVGLVSTGRKKGDEASSHHSHLIYYMKFKRMAALSIDPRLKLQMPKLRIQNEATAEEIEGLIRVYADGRVERPPIIPNVSCSTTASDKGVTAKDVLIDNFTNTWARIYVANSQRNLPLLVYFHGGGFCVGSAAWSCYHEFLLDLASKAKCVILSVNYRLSPEHRLPAAYEDGFNTIMWLKKHAITNPIEHKWWLGNCNPSKLFLAGDSAGANIAYNIVARLGLNEPTILKPLTLKGIILIQPFFGGESRTKSEKLAAQPSSASALTLDAADTYWRLSLPPGANRDHSWSNPLMNGGAKLRETKVPPLMVCISELDILVDRNLEFCAAMAAAGKQVERVILKGVGHSFQILNKDQISCVRRREMMGCIQAFIQQ 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13442439 13443677 - Lsi07G009850.1 Lsi07g00985 667407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00985 381 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 210 222 IPR033140 -
Lsi07g00985 381 Pfam alpha/beta hydrolase fold 127 356 IPR013094 GO:0016787
Lsi07g00985 381 PANTHER CARBOXYLESTERASE 6-RELATED 51 379 - -
Lsi07g00985 381 SUPERFAMILY alpha/beta-Hydrolases 66 380 IPR029058 -
Lsi07g00985 381 PANTHER ARYLACETAMIDE DEACETYLASE 51 379 - -
Lsi07g00985 381 MobiDBLite consensus disorder prediction 1 22 - -
Lsi07g00985 381 Gene3D alpha/beta hydrolase 57 380 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00275 Lsi-Chr4:2793420 Lsi07g00985 Lsi-Chr7:13442439 9.91E-131 dispersed
Lsi04g02135 Lsi-Chr4:28485431 Lsi07g00985 Lsi-Chr7:13442439 3.22E-64 dispersed
Lsi07g00985 Lsi-Chr7:13442439 Lsi08g00927 Lsi-Chr8:17659827 2.19E-63 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00985 - - vvi:100241294 447.973