Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g00987 ATGTCGCCTGTTGATTCTTCACGGGAGGAGAATGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGGTATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGAGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGCGGAAATGAGGACCATGTTGCAATTATAAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGAATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCTAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAAAGGAAAGAAGCAGCTGAGAGCACATTGTTAGCGTACAAGTCTGCTCAGGATATTGCTCTTGCCGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGATGAAGCAATTTCTGAGCTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGAGCAATGACGAAGCTGGCGATGAGATTAAGGAAGCAGCATCAAAACGTGAATCAGGGGAGGGACATGGACAGTAG 801 45.69 MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGSNDEAGDEIKEAASKRESGEGHGQ 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13570780 13574550 + Lsi07G009870.1 Lsi07g00987 667409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g00987 266 MobiDBLite consensus disorder prediction 245 266 - -
Lsi07g00987 266 MobiDBLite consensus disorder prediction 242 266 - -
Lsi07g00987 266 SMART 1433_4 8 253 IPR023410 -
Lsi07g00987 266 PANTHER 14-3-3 PROTEIN 5 258 IPR000308 -
Lsi07g00987 266 PIRSF 14-3-3 3 254 IPR000308 -
Lsi07g00987 266 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lsi07g00987 266 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lsi07g00987 266 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lsi07g00987 266 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lsi07g00987 266 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lsi07g00987 266 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lsi07g00987 266 Pfam 14-3-3 protein 14 238 IPR023410 -
Lsi07g00987 266 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 258 - -
Lsi07g00987 266 Coils Coil 14 34 - -
Lsi07g00987 266 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lsi07g00987 266 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lsi07g00987 266 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lsi07g00987 266 Gene3D - 2 251 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g02246 Lsi-Chr4:29500335 Lsi07g00987 Lsi-Chr7:13570780 1.24E-160 dispersed
Lsi04g02270 Lsi-Chr4:29715150 Lsi07g00987 Lsi-Chr7:13570780 7.86E-122 dispersed
Lsi07g00987 Lsi-Chr7:13570780 Lsi11g01569 Lsi-Chr11:23995462 4.10E-126 dispersed
Lsi07g00987 Lsi-Chr7:13570780 Lsi08g00980 Lsi-Chr8:18276685 8.80E-163 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g00987 K06630 - csv:101222068 499.59