Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01039 ATGATGTCTGTTTTTTGTCTCTGCTTCTGCCTTCTGTTTGGTGCCGCCGCCGCGGGCGGTGGAGGCGGCGGCGGCCACTCCAGGGAGCTCGACAACACACCCACCTGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTCTTGGAAAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTATGAAGCTCTGGAGAAGGTTAAGGCTGAGTTGATGATTTTGGGTTTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATTTGTATACCTCCGGCCATTGCAAACTCCATGTTGCCTTGTCACCTTGAAGAGAAAGATGGCTCATCATCTGCAGCCGGTGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCCGGTGGCCACAATGTCGTCTCATGTAAGGATGGTAAAGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGGGCTGCTTTTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACTCTACGCAACGGATTCATAACGGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTTGTCGGTGTGAGGATGGCATATATTGTTCTGGGCATCATTTATCCCTCTGATTGTAAGAAAAATCTCTTTCTTCAGGGGAAATTCACCAGATTGGCTAGTTCGTTTTTATACAATGATGGCTGTTTTAAACTCACACAGATAATCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACTAGGATGGCTCTTGAAATCACTGAGAAACATGCAGTAGTCCAGGGAATTCCTCTCGTGCAAGGATCTGACAAATATTTCTGGTTCGGTCGACCTCAATTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCATTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCCGAGTTCTTGCTTCTCTGATGGTCGCATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGCCGCATTATTTCTATGCAGCTATGTTACGCTTCCGATATACGCCCTTGTAACTCAGATGGGTTCGGGTATGAAGAAGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCATGAAACAGCCAAGAAGAAGAAGCGGGTTCAACGAGCCTCAGCAACTAAAACACTTGGAGGTAGTTCAAATGCTTCACCTCTACGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACTATGGGACACTCTATACGTCTGCCTGCATATGAGGACCTTGAGTCGTCTGATTATGAGGGCGATCCATTAGCAACACCTACACAAGTATCAACAACTGAATCGATTAATGTTGATGTAGATGGAGAAGAAATACGTCAAATTGCTGAAACAGGCCAACCCCAAAGTACAAAGCAAACTAAAGAAGAAGGAGATGAGTTCTCATTTAAAAAGCCTGCAGCACCACTGAAATAA 1626 42.68 MMSVFCLCFCLLFGAAAAGGGGGGGHSRELDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCHLEEKDGSSSAAGEDEHHRRLQWLIRRSLAGGHNVVSCKDGKVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVRMAYIVLGIIYPSDCKKNLFLQGKFTRLASSFLYNDGCFKLTQIILAVGSKLQAILTRMALEITEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQTTYILSTLYSFGPSSCFSDGRILTIIKVGLGVAALFLCSYVTLPIYALVTQMGSGMKKSIFDEQTSKALKKWHETAKKKKRVQRASATKTLGGSSNASPLRSFGRSLRRFKTMGHSIRLPAYEDLESSDYEGDPLATPTQVSTTESINVDVDGEEIRQIAETGQPQSTKQTKEEGDEFSFKKPAAPLK 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15744283 15748595 - Lsi07G010390.1 Lsi07g01039 667461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01039 541 PANTHER MLO-LIKE PROTEIN 195 511 - -
Lsi07g01039 541 MobiDBLite consensus disorder prediction 486 502 - -
Lsi07g01039 541 PANTHER MLO-LIKE PROTEIN 21 194 - -
Lsi07g01039 541 MobiDBLite consensus disorder prediction 481 541 - -
Lsi07g01039 541 MobiDBLite consensus disorder prediction 430 453 - -
Lsi07g01039 541 Pfam Mlo family 196 453 IPR004326 GO:0006952|GO:0016021
Lsi07g01039 541 Pfam Mlo family 28 194 IPR004326 GO:0006952|GO:0016021
Lsi07g01039 541 PANTHER MLO-LIKE PROTEIN 1 195 511 IPR004326 GO:0006952|GO:0016021
Lsi07g01039 541 PANTHER MLO-LIKE PROTEIN 1 21 194 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00525 Lsi-Chr1:4298311 Lsi07g01039 Lsi-Chr7:15744283 3.60E-162 dispersed
Lsi07g01039 Lsi-Chr7:15744283 Lsi08g00776 Lsi-Chr8:16142106 3.16E-116 dispersed
Lsi07g01039 Lsi-Chr7:15744283 Lsi02g01429 Lsi-Chr2:19828608 1.75E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01039 K08472 - csv:116402632 782.326