Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01119 ATGGCTTCGAGCAATGATATTTTTCACTTTAATGAGCTTTTCACGTCTTTCGTCTCGTCTGCAAATTCCGATGATTGGAGTCTCAGTGCGATGCATAATAACAGCCATACAGACTTCACAAGGAAATCTTATGCTTCATTTGATAAACAACCAGCCTTTGATACTTCCTACTTCAGTAAAAGTAGTTGCGAAAATTCGGTGTTAACTTCATCTGAGCCACTGCGAACATCCGACATTAGAGAACAAGATGCTCAATATCCGAGTTATTCAGATGCTAATGTGCTCGACTCGTGTAGGAACACAGTGGAATTTGGAAATGGTAGCTCGACATTTGCATCAGTCTCAAGTGGAACAGGTTCTCTCTATATGGATAATGTTCAGCAGTCGGCTCAACTATTTCCCATGATTGAAGGTGAACTTATGGAAAGCATAACTAGCCTACCTGACTTCTGTGACGAGCATGTTTCTGAGGATTTTACCATGGATCTTCCGGATATCTCGCTCGTTGAGGATCTATTTCAATGGTTTGCTTCTTCACCAGAGAACGGAACGAATGGAGTGACGACAACATTGAACCATAACCTTCCACCTGTGACGGGAGTTTCAACATTGGTATCCAATCTGGTTGAAGTTAATAAGAAAGTTGATGATTCGAGCAAAGCATCCGTTGTTTCCGCTCAAAGTTTAATAACTAATACATCACAATCCAGTGAACAAGATAACAGTGTCATAATGCAGAATGCAAAAGATAGACTGTTTGATAGTTTGGGGTTAGGCACAGGATGTCCGGTGGGCAAAACTTGGGATAACATAATAACAGACACTCATGGCAGTTCTTTGGGTGGGTGCAACAGTATGTCCACGTGCACGTCGAAGTTAGCCACGGGCTCGACGGATCTTCCTCGCAAGAGATTATTTTGGGAGTTGGGAATTGAAGAGCTTTTGGATGGTCTAGGCAACACTAGCTCTGTAGCCAAATCAAGTGTTGAGAATCATCAATCAATTTCCTCAAGAAGGTCAAAGATCGAAAGATTGTCTCTCGACAGTAATTCAATCCAATTACTCGACCCTTGCACCAGCATGAATCTGACACAACCTTCGTTCGCTGTTGATTGTTTCCCATGTAGAAAAGAAGCTGTGCCAAAGTCACAGGTAAGTTCATGGATTGATGACAGCTATAGCACCAATATTGGAGGCTCCATTTTAGAACTATCTCATAAGAGTGAGGAGCCTGCTAAGACTTGTAAGAAGAGGGCGAAACCTGGAGAGAGTAATCGTCCAAGACCGAAGGATCGACAACAGATCCAGGATCGTATCAAAGAGTTGAGAGGAATTATCCCTAGTGGTGCAAAGTGTAGCATCGATTCGTTGTTGGATCGGACCATCAAGTACATGCTTTTCTTGCAAAGTGTTACGAAATACGCAGACAAACTTAAAGAAACTAATAAACCAAAGTTAATTGACCAAGAAGATGGAGTGGCTGTAAATGACAAATGTACTACAGACAGAGGCGGTGGTGGAGTTACTTGGGCGTTTAAAGTGGGAGCGACGCCAATGGTTTGCCCGGTTATAGTCGAAGACCTTAGTTCACCTGGTCAAATGCTCGTTGAGATGCTATGTGAGGAAAGAGGCTTCTTTCTCGAGATAGCCGATATGATTCGTAGCTATGGATTGACGATTTTGAAAGGCGTGATGGAAATCCGAGAGGACAAGATATGGGCGCAGTTCGTCGTCGAGGTGAAACTAAATGCTAACCAAAGCATTACAAGGATAAATGTGTTTTTGTCCCTCATGGAGCTTCTACAACAAGCAAACATTGGTGGAACTGAAGTAGTAGCTAATTAG 1845 42.66 MASSNDIFHFNELFTSFVSSANSDDWSLSAMHNNSHTDFTRKSYASFDKQPAFDTSYFSKSSCENSVLTSSEPLRTSDIREQDAQYPSYSDANVLDSCRNTVEFGNGSSTFASVSSGTGSLYMDNVQQSAQLFPMIEGELMESITSLPDFCDEHVSEDFTMDLPDISLVEDLFQWFASSPENGTNGVTTTLNHNLPPVTGVSTLVSNLVEVNKKVDDSSKASVVSAQSLITNTSQSSEQDNSVIMQNAKDRLFDSLGLGTGCPVGKTWDNIITDTHGSSLGGCNSMSTCTSKLATGSTDLPRKRLFWELGIEELLDGLGNTSSVAKSSVENHQSISSRRSKIERLSLDSNSIQLLDPCTSMNLTQPSFAVDCFPCRKEAVPKSQVSSWIDDSYSTNIGGSILELSHKSEEPAKTCKKRAKPGESNRPRPKDRQQIQDRIKELRGIIPSGAKCSIDSLLDRTIKYMLFLQSVTKYADKLKETNKPKLIDQEDGVAVNDKCTTDRGGGGVTWAFKVGATPMVCPVIVEDLSSPGQMLVEMLCEERGFFLEIADMIRSYGLTILKGVMEIREDKIWAQFVVEVKLNANQSITRINVFLSLMELLQQANIGGTEVVAN 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16606113 16611701 - Lsi07G011190.1 Lsi07g01119 667541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01119 614 MobiDBLite consensus disorder prediction 408 434 - -
Lsi07g01119 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 20 606 - -
Lsi07g01119 614 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 432 475 IPR036638 GO:0046983
Lsi07g01119 614 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 20 606 IPR043561 GO:0003700|GO:0006355
Lsi07g01119 614 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 419 468 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi06g00626 Lsi-Chr6:9015248 Lsi07g01119 Lsi-Chr7:16606113 1.96E-81 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01119 - - csv:101210125 1063.14