Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi07g01159 | ATGAGTGGCAGTGAGATGGAGAAACCACCAAAAGACAAGGAGACGAAGACCCCGCCTCCTCCTACTACTACTACCCAGGAGCAGACTACAACCACAAGTGCTGGCACAGTTAATCCTGATTGGTCGGGTTTTCAGGCATATTCTCCTATTCCTCCACATGGTTTCTTGGCATCAAGCCCCCAAGCCCACCCATATATGTGGGGAGTTCAGGTACATGCACTGCTAGTTTTTTGGAGAATACAATATCCTTCATCAGTAAATTGGCTCTTGCTTCTTTATTTAGTTACCTTTGGAAGGAGTGCTTTGTGTATTTATCTAAATGTGGGTTTTTACTTACAGCATATTATGCCTCCTTATGGCACGCCTCCACATCCATATGTTGCAATGTATCCACCTGGTGGCATATATGCTCACCCTTCCATTCCCCCGGGATCGTATCCTTTTAGCCCATTTGCAATGCCTTCCCCAAATGGAATCACTGAGGCCTCTGGTAATACGGCATGCAGTTTGGAGGGAGACGTTAAGCCACCTGAAGTGAAGGAAAAGCTGCCAATTAAAAGATCGAAAGGAAGTCTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTGGGTAAAACATCTGGAACATCTGCCAATGGAGCATACTCTAAGAGGTTGTTTAACTTTTCTAGAAATTGCCCATGTAGAATAATAATTGGTGGATGCTTTATTTATTTTATTAGGAAATGA | 735 | 43.67 | MSGSEMEKPPKDKETKTPPPPTTTTQEQTTTTSAGTVNPDWSGFQAYSPIPPHGFLASSPQAHPYMWGVQVHALLVFWRIQYPSSVNWLLLLYLVTFGRSALCIYLNVGFYLQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPSPNGITEASGNTACSLEGDVKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKRLFNFSRNCPCRIIIGGCFIYFIRK | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 17052474 | 17059551 | + | Lsi07G011590.1 | Lsi07g01159 | 667581 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi07g01159 | 244 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Lsi07g01159 | 244 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Lsi07g01159 | 244 | Pfam | G-box binding protein MFMR | 3 | 70 | IPR012900 | - | |
Lsi07g01159 | 244 | Pfam | G-box binding protein MFMR | 113 | 142 | IPR012900 | - | |
Lsi07g01159 | 244 | Pfam | Disordered region downstream of MFMR | 181 | 219 | - | - | |
Lsi07g01159 | 244 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 112 | 220 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Lsi07g01159 | 244 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 71 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Lsi07g01159 | 244 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
Lsi07g01159 | 244 | PANTHER | BZIP TRANSCRIPTION FACTOR 16 | 112 | 220 | - | - | |
Lsi07g01159 | 244 | PANTHER | BZIP TRANSCRIPTION FACTOR 16 | 1 | 71 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi07g01159 | Lsi-Chr7:17052474 | Lsi05g02094 | Lsi-Chr5:27788450 | 3.14E-06 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi07g01159 | K09060 | - | csv:101206627 | 298.13 |