Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01159 ATGAGTGGCAGTGAGATGGAGAAACCACCAAAAGACAAGGAGACGAAGACCCCGCCTCCTCCTACTACTACTACCCAGGAGCAGACTACAACCACAAGTGCTGGCACAGTTAATCCTGATTGGTCGGGTTTTCAGGCATATTCTCCTATTCCTCCACATGGTTTCTTGGCATCAAGCCCCCAAGCCCACCCATATATGTGGGGAGTTCAGGTACATGCACTGCTAGTTTTTTGGAGAATACAATATCCTTCATCAGTAAATTGGCTCTTGCTTCTTTATTTAGTTACCTTTGGAAGGAGTGCTTTGTGTATTTATCTAAATGTGGGTTTTTACTTACAGCATATTATGCCTCCTTATGGCACGCCTCCACATCCATATGTTGCAATGTATCCACCTGGTGGCATATATGCTCACCCTTCCATTCCCCCGGGATCGTATCCTTTTAGCCCATTTGCAATGCCTTCCCCAAATGGAATCACTGAGGCCTCTGGTAATACGGCATGCAGTTTGGAGGGAGACGTTAAGCCACCTGAAGTGAAGGAAAAGCTGCCAATTAAAAGATCGAAAGGAAGTCTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTGGGTAAAACATCTGGAACATCTGCCAATGGAGCATACTCTAAGAGGTTGTTTAACTTTTCTAGAAATTGCCCATGTAGAATAATAATTGGTGGATGCTTTATTTATTTTATTAGGAAATGA 735 43.67 MSGSEMEKPPKDKETKTPPPPTTTTQEQTTTTSAGTVNPDWSGFQAYSPIPPHGFLASSPQAHPYMWGVQVHALLVFWRIQYPSSVNWLLLLYLVTFGRSALCIYLNVGFYLQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPSPNGITEASGNTACSLEGDVKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKRLFNFSRNCPCRIIIGGCFIYFIRK 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17052474 17059551 + Lsi07G011590.1 Lsi07g01159 667581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01159 244 MobiDBLite consensus disorder prediction 1 15 - -
Lsi07g01159 244 MobiDBLite consensus disorder prediction 1 37 - -
Lsi07g01159 244 Pfam G-box binding protein MFMR 3 70 IPR012900 -
Lsi07g01159 244 Pfam G-box binding protein MFMR 113 142 IPR012900 -
Lsi07g01159 244 Pfam Disordered region downstream of MFMR 181 219 - -
Lsi07g01159 244 PANTHER G-BOX-BINDING FACTOR 3-RELATED 112 220 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lsi07g01159 244 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 71 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lsi07g01159 244 MobiDBLite consensus disorder prediction 18 37 - -
Lsi07g01159 244 PANTHER BZIP TRANSCRIPTION FACTOR 16 112 220 - -
Lsi07g01159 244 PANTHER BZIP TRANSCRIPTION FACTOR 16 1 71 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g01159 Lsi-Chr7:17052474 Lsi05g02094 Lsi-Chr5:27788450 3.14E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01159 K09060 - csv:101206627 298.13