Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01214 ATGGAAGAAAGTAAAAACCATCTTTCTGAACAAAGCACAAAGGGGACTGCTAAAAGCACCAAGGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAGACCATCATCCTGCTCAAGTCTTTGTTGCATGGTACATATGCTAGGGCTTTTTTTGGTTCAAAGGATGTTAAAAAGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAAATTCTTGATCTGTGTGATCGTCACTTCTTCTATGAACAAATGGAAAACTATAATCAGCCCTTTCTTGATGCGTTGAGTGAATATGATGATGGTCGCGATCTTTCTAATTATGATTTTGATCAAGATAGTCTTGGTGCACCATGTGATGATGAAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATATCCAATAAGTACAAAGAGGGCCTGCATAATATCTTTGATCAAGAGAAGTTGAAGCTATGGGAAGAGTTATATGAAATGACTGATGTTTATACAGATAGATGGCTCTCCTCAGCACGAGCTTTCTTGGAGGAGTGCTCATTTTCAGATAAACCACCAGTTCCATCTGCTGATCAGACACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATGTCTTGGTGACTTCTGGAGCATTGGTACCCAGCCTTGTGAAATGCTTACTATTTCGGCTCGATCATCTAATAACACCTGGAAATGTTTACAGTTCGTGGGAAGTGGGAAAACTACAATGTTTCCAGTGGATTAAGGAGCGTTTTGACAAGTCAAATGTTCGTTTCTGCGCAATAGGTGATGGATGGGAAGAGTGTGAAGCTGCACAGTCCATGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGTCCTCACAGGTTTCCTGGTCTGTCTTTGAAAACAATGGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAGGAATAG 957 40.02 MEESKNHLSEQSTKGTAKSTKDQKLNVYVWDMDETIILLKSLLHGTYARAFFGSKDVKKGEELGKIWEKQILDLCDRHFFYEQMENYNQPFLDALSEYDDGRDLSNYDFDQDSLGAPCDDENKRKLAFRQRAISNKYKEGLHNIFDQEKLKLWEELYEMTDVYTDRWLSSARAFLEECSFSDKPPVPSADQTRNSTSRSSQHVNVLVTSGALVPSLVKCLLFRLDHLITPGNVYSSWEVGKLQCFQWIKERFDKSNVRFCAIGDGWEECEAAQSMKWPFVKIELQPGSPHRFPGLSLKTMGFYFSVIYGNSDSSSDEE 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17706207 17709704 - Lsi07G012140.1 Lsi07g01214 667636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01214 318 PANTHER EYES ABSENT 7 309 IPR028472 GO:0004725
Lsi07g01214 318 TIGRFAM EYA-cons_domain: EYA conserved domain 25 300 IPR006545 GO:0007275
Lsi07g01214 318 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 7 309 - -
Lsi07g01214 318 SUPERFAMILY HAD-like 25 282 IPR036412 -
Lsi07g01214 318 Gene3D - 26 288 IPR038102 -
Lsi07g01214 318 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 25 283 - -
Lsi07g01214 318 SFLD Haloacid Dehalogenase 25 283 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01214 - - cmo:103490796 580.096