Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi07g01431 | ATGGAGTTCTCTTATATTTCTCCATTGCTTTTGTTTTTCTTTTTGCTTCAAACATCTGCCATTCCTACCAAAAAGTCTTACATTGTTTATTTGGGATCACACCCATTCGGACCGAACCCTTCGGTATATGATGTCCAACTCGCAACCGAGTCCCAATATGATATATTAGGATCAGTCATGGGAAGCAAATTGGCAGCCAAAGAATCAATTATGTATTCGTACAATAAATACATTAATGGTTTTGCTGCCGTACTTGATGAAAAAGAAGCCATGGCTCTTGCAAAGAATCCAAGCGTGGTGTCGGTTTTTGAAAACAAGGAAAGAAAATTGCATACAACACGATCATGGAGTTTTCTTGGGGTGGATAGTGATGCAGGAATTCCTCCAAATTCCATTTGGAAAGCTGCAAGGTTTGGGGAAGATACAATTATAGGCAACCTTGACACAGGTGCTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGTCCTATTCCTTCAAGGTGGAAGGGAGCTTGTGAAGGTGGCGCCAACTTTCGTTGCAATAGGAAGTTGATTGGAGCAAGATATTTCTACCAAGGATTTGCAATGTCAAATGGTCCTCTCAACATTAGTTTCAACAGTGCAAGAGACCAAGAAGGCCATGGTTCACACACTTTGTCCACTGCCGGCGGCGACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTGTGGCTGCCTACAAGGTGTGCTGGCCTGCGCCTTCGGGTGGCTGTTTTGATGCCGATATCCTAGCCGGTTTCGAAGCCGCCATTAGCGATGGTGTCGATGTTCTCTCTGTCTCTCTTGGTAGCGCAGCTCAAGAGTTTGCTTACGATGCCATTTCGATTGGGGCGTTCCACGCCGTTCAACAAGGAATTGTCGTGGTTTGCTCTGGAGGAAATGACGGCCCGTCTCCTGGAACTGTAAGTAATATTTCTCCTTGGATGTTTACCGTTGCAGCTAGTACCATCGACCGAGACTTCACCAGTTACGTCGCGCTCGGAAACAAGAAGCATATCAGGGGTTCAAGTCTTTCATCTAGTGGATTGCCTAATGGTAAATTCTACCCTTTGATAAATGCTATAGAAGCAAAAGCTGCCAATGCCACAGACAGCCTTGCGCAACTTTGTGAAGCTGGATCACTTGATCCAACAAAGGCAAAAGGGAAGATTATAGTTTGTCTTAGAGGAGACAATGCAAGAGTTGAAAAGGGTTTCGTTGTTCTTCGTGCTGGTGGCGTCGGTATGATTTTGGTTAATGACAAGAAAGATGGATCAGGCACTTTGGCTGATTCCCATATTCTTCCTGCTACTCATTTAAGCTACACCGACGGACTTTCAATCGCTCGATATATTAACTCCACCAAAACACCCATTGCTCACATAACCCATGTAAAGACTGAGGTAGGAATTAAGCCATCACCTGTCATGGCTGACTTCTCATCAAGAGGCCCTAATACCATCACAGAGGCCATGCTCAAGCCTGATATAACAGCGCCGGGAGTGAATATAATCGCATCGGTCACGACAGATGTAACTGCAACGGAATCGCCATTCGATTCGCGTCGGGTGCCTTTTAACGTTGAATCTGGCACTTCCATGTCTTGCCCACACATTTCAGGTGTTGTTGGCCTTTTGAAGACTCTTTATCCTACATGGAGTCCTGCAGCTATCAAATCTGCCATCATGACTACCGCCAAAACAAGAGATAACACCCAGCAAACCATATTGAACACCAACAAAGTGAAGGCAACCCCATTTGATTATGGTGCAGGACATGTCCATCCCAACAATGCAATGGACCCTGGCCTCGTTTACGACACGACCATCGACGACTACTTGAACTTCCTATGTGCACGTGGCTACAACGCCCTAGCTCTCAAGAAATTCTACAACAAACCATTCGTCTGCGCCAAATCATTCGCAATCACAGATCTCAACTACCCGTCAATCTCGATCCCAGAATTGCGAATGGGTGCCCCGGTAACGGTCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTATGTGGCACGCGTGAAGGTGTCCCCGATGCTCTCAGTTTCGGTCGAGCCGAGTACGTTGCAGTTTAGTAGTGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCAATACAAAGGAAAACAACAACGTCAAGGCCATGTGTTTGGGACATTGATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTCTTGCAGTGAAACTAGGATGA | 2298 | 46.04 | MEFSYISPLLLFFFLLQTSAIPTKKSYIVYLGSHPFGPNPSVYDVQLATESQYDILGSVMGSKLAAKESIMYSYNKYINGFAAVLDEKEAMALAKNPSVVSVFENKERKLHTTRSWSFLGVDSDAGIPPNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPIPSRWKGACEGGANFRCNRKLIGARYFYQGFAMSNGPLNISFNSARDQEGHGSHTLSTAGGDFVPGANIFGYGNGTAKGGSPKARVAAYKVCWPAPSGGCFDADILAGFEAAISDGVDVLSVSLGSAAQEFAYDAISIGAFHAVQQGIVVVCSGGNDGPSPGTVSNISPWMFTVAASTIDRDFTSYVALGNKKHIRGSSLSSSGLPNGKFYPLINAIEAKAANATDSLAQLCEAGSLDPTKAKGKIIVCLRGDNARVEKGFVVLRAGGVGMILVNDKKDGSGTLADSHILPATHLSYTDGLSIARYINSTKTPIAHITHVKTEVGIKPSPVMADFSSRGPNTITEAMLKPDITAPGVNIIASVTTDVTATESPFDSRRVPFNVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTQQTILNTNKVKATPFDYGAGHVHPNNAMDPGLVYDTTIDDYLNFLCARGYNALALKKFYNKPFVCAKSFAITDLNYPSISIPELRMGAPVTVNRRVKNVGTPGTYVARVKVSPMLSVSVEPSTLQFSSVGEEKAFKVVFQYKGKQQRQGHVFGTLIWSDGKHFVRSPLAVKLG | 765 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 20842733 | 20850509 | + | Lsi07G014310.1 | Lsi07g01431 | 667853 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi07g01431 | 765 | Gene3D | - | 637 | 764 | - | - | |
| Lsi07g01431 | 765 | Coils | Coil | 379 | 399 | - | - | |
| Lsi07g01431 | 765 | CDD | Peptidases_S8_3 | 109 | 586 | IPR034197 | - | |
| Lsi07g01431 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 139 | 158 | IPR015500 | - | |
| Lsi07g01431 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 212 | 225 | IPR015500 | - | |
| Lsi07g01431 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 550 | 566 | IPR015500 | - | |
| Lsi07g01431 | 765 | SUPERFAMILY | Protease propeptides/inhibitors | 25 | 108 | - | - | |
| Lsi07g01431 | 765 | Pfam | Fibronectin type-III domain | 665 | 762 | IPR041469 | - | |
| Lsi07g01431 | 765 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 25 | 765 | - | - | |
| Lsi07g01431 | 765 | Pfam | PA domain | 394 | 467 | IPR003137 | - | |
| Lsi07g01431 | 765 | SUPERFAMILY | PA domain | 404 | 476 | IPR046450 | - | |
| Lsi07g01431 | 765 | Pfam | Subtilase family | 140 | 612 | IPR000209 | GO:0006508|GO:0008236 | |
| Lsi07g01431 | 765 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 551 | 561 | IPR023828 | - | |
| Lsi07g01431 | 765 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 25 | 765 | IPR045051 | - | |
| Lsi07g01431 | 765 | Gene3D | Peptidase S8/S53 domain | 141 | 633 | IPR036852 | GO:0004252|GO:0006508 | |
| Lsi07g01431 | 765 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 111 | IPR037045 | - | |
| Lsi07g01431 | 765 | SUPERFAMILY | Subtilisin-like | 110 | 624 | IPR036852 | GO:0004252|GO:0006508 | |
| Lsi07g01431 | 765 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 115 | 620 | - | - | |
| Lsi07g01431 | 765 | Gene3D | - | 345 | 489 | - | - | |
| Lsi07g01431 | 765 | CDD | PA_subtilisin_like | 351 | 482 | - | - | |
| Lsi07g01431 | 765 | Pfam | Peptidase inhibitor I9 | 26 | 111 | IPR010259 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi02g01177 | Lsi-Chr2:14568017 | Lsi07g01431 | Lsi-Chr7:20842733 | 0 | dispersed | |
| Lsi02g01178 | Lsi-Chr2:14620661 | Lsi07g01431 | Lsi-Chr7:20842733 | 0 | dispersed | |
| Lsi03g00648 | Lsi-Chr3:8183360 | Lsi07g01431 | Lsi-Chr7:20842733 | 1.11E-09 | dispersed | |
| Lsi03g00649 | Lsi-Chr3:8198207 | Lsi07g01431 | Lsi-Chr7:20842733 | 2.87E-09 | dispersed | |
| Lsi07g00238 | Lsi-Chr7:2631138 | Lsi07g01431 | Lsi-Chr7:20842733 | 1.88E-155 | dispersed | |
| Lsi07g01431 | Lsi-Chr7:20842733 | Lsi07g01435 | Lsi-Chr7:20905120 | 0 | dispersed | |
| Lsi07g01436 | Lsi-Chr7:20918583 | Lsi07g01431 | Lsi-Chr7:20842733 | 1.06E-113 | dispersed | |
| Lsi10g01083 | Lsi-Chr10:15100733 | Lsi07g01431 | Lsi-Chr7:20842733 | 2.32E-168 | dispersed | |
| Lsi07g01431 | Lsi-Chr7:20842733 | Lsi07g01432 | Lsi-Chr7:20854633 | 1.51E-151 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi07g01431 | - | - | csv:101212014 | 1265.75 |