Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01432 ATGATATGTGAAGAAAAGTCTCTTGATCCTAAGAAGGTAAAAGGGAAGATTGTAATTTGCCTTAGACGGGGCATTGCAAGAGTGGACAAAGGTTTTGTGGCTGCTGAAGCAGGTGCTGTTGGAATGATTCTTGCTAATGACGAAGAAAATGGAGATGAACTTTTAGCTGATGCTCATGTTCTTCCTGCTTCCCATATAACCTATTCTGATGGTCAATTAGTCTACCAATACATCAACTCTACCAAAATTCCAATGGCTTACATGACACACGTGAGGACAGAGTTGGGAGTCAAACCAGCACCACCTGATATAACAGCACCAGGTGTGAATATATTAGCAGCTTACTCAGAAGATACATCACCAACAGGTTCAAGTTTAGATAAACGTCGAGTGGCATTTAATGTAGATTCTGGAACTTCCATGTCATGCCCTCATATTTCTGGCATTGTTGGCCTTCTCAAAACTCTTTATCCTACATGGAGTCCTGCAGCTATTAGATCTGCAATCATGACCACAGCTGGAACCAAAGCCAATGACTTGAATCCAATACTAAGCACAAAGCAAGTGAAAGCAAATGCATTAGCATATGGAGCAGGCCATGTTCGTCCAAACGAAGCAGCAAATCCAGGCCTTGTTTATGACCTTTCCACCAAAGACTACTTGAATTACCTATGTGCTCGAGGCTACAACCAAACCCAAATCAAACTATTCTCCAATGACACTTCATTTGTTTGTTCAAAATCATTCAAAATAACAGATTTTAACTACCCGTCGATCTCGATACCGGAGCTCAAATCGGAGGCTGTCGTGAACATCACAAGGAGAGTGAAGAATGTGGGAAGTCCAGGCACGTATGTTGTTCAAGTCAATGCGCCGCCGGGGGTTTCGGTTTCGGTTGAGCCAACTAGTTTGAAGTTCACTGGAATTGATGAAGAGAAGAGTTTTAGAGTTGTGGTGAAGAGTAGTGTGCCTAATGATTTTCGTCAAAAGTATGTGTTTGGGGGACTTGAATGGTCTGATGGGATCCATCGTGTTAGAAGTCCGATTGTAGTGAGATTAGGCGGGTGA 1068 42.6 MICEEKSLDPKKVKGKIVICLRRGIARVDKGFVAAEAGAVGMILANDEENGDELLADAHVLPASHITYSDGQLVYQYINSTKIPMAYMTHVRTELGVKPAPPDITAPGVNILAAYSEDTSPTGSSLDKRRVAFNVDSGTSMSCPHISGIVGLLKTLYPTWSPAAIRSAIMTTAGTKANDLNPILSTKQVKANALAYGAGHVRPNEAANPGLVYDLSTKDYLNYLCARGYNQTQIKLFSNDTSFVCSKSFKITDFNYPSISIPELKSEAVVNITRRVKNVGSPGTYVVQVNAPPGVSVSVEPTSLKFTGIDEEKSFRVVVKSSVPNDFRQKYVFGGLEWSDGIHRVRSPIVVRLGG 355
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 20854633 20861623 - Lsi07G014320.1 Lsi07g01432 667854
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01432 355 Pfam Fibronectin type-III domain 253 351 IPR041469 -
Lsi07g01432 355 SUPERFAMILY Subtilisin-like 101 265 IPR036852 GO:0004252|GO:0006508
Lsi07g01432 355 Gene3D - 1 93 - -
Lsi07g01432 355 Gene3D - 224 353 - -
Lsi07g01432 355 ProSitePatterns Serine proteases, subtilase family, serine active site. 138 148 IPR023828 -
Lsi07g01432 355 ProSiteProfiles Serine proteases, subtilase domain profile. 1 207 - -
Lsi07g01432 355 SUPERFAMILY PA domain 10 87 IPR046450 -
Lsi07g01432 355 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 101 IPR045051 -
Lsi07g01432 355 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 102 354 IPR045051 -
Lsi07g01432 355 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 102 354 - -
Lsi07g01432 355 Pfam Subtilase family 99 199 IPR000209 GO:0006508|GO:0008236
Lsi07g01432 355 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 2 101 - -
Lsi07g01432 355 Pfam PA domain 11 72 IPR003137 -
Lsi07g01432 355 CDD PA_subtilisin_like 3 86 - -
Lsi07g01432 355 Gene3D Peptidase S8/S53 domain 102 220 IPR036852 GO:0004252|GO:0006508
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi01g00203 Lsi-Chr1:1900585 Lsi07g01432 Lsi-Chr7:20854633 3.48E-69 dispersed
Lsi07g01432 Lsi-Chr7:20854633 Lsi07g01438 Lsi-Chr7:20932916 0 dispersed
Lsi07g01431 Lsi-Chr7:20842733 Lsi07g01432 Lsi-Chr7:20854633 1.51E-151 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01432 - - csv:105434448 575.859