Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01433 ATGGGGTCTTATATTGTTTATTTGGGATCACATTCACATGGGTTGAATCCTTCTGCAATTGATATCCAAATTGCAACAGAATCTCATTATAATTTACTTGGATCCTTTTTAGGAAGCAATGAAGCAGCTAAGGAAGCAATTTTCTACTCATACGATAGACATATCAATGGCTTTGCAGCTGTGCTAGATCAGAAAAACATCCTGATGTGGTATCAGTTCATGAAAACAAAGGAAGAAAACTGCATACAACACTTTCATGGAACTTTCTTGGAGTTGAGAATGATGGTGCAATTCCTTCCAACTCTATTTGGAGTCTTGCAAGTTTCGGTGAATCAACAATCATTGGCAACCTTGACACAGCTGATCGGAGCAAGGTATTTCAACAAAGGGTATGCAGCCATTGCGGGACCTCTAAACTCAAGCTATGAAACAGCAAGGGACCATGAAGGACATGGAACACACACATTATCCACAGCAGGAGGCCATTTTGTTGAAGGTGCTAATATATTTGGGTATGGTAATGGCACTGCAAAAGGAGGGTCTCCTAAAGCTCATGTTGCTGCCTATAAAGTTTGTTGGCCTCCTTTGTTGTTTGTTGGTGCGTGTTTTGAGGCAGACATTCTAGCTGGCTTTGAAGCTGCCATTAGTGATGGAGTTGATGTTCTGTCTGTTTCACTTGGTGGAGGTTCTCAAGATTTTGTACATGATTCAATAGCTATAGGAGCTTTTCATGCAGTTCAGAATGGTATTACTGTTGTTTGTTCTGCTGGAAACTCTGGACCAACTCCTGGCTCTGTTTCTAATGTTGCACCATGGATTATAACTGTGGGAGCTAGCACAATTGATCGGCTTTTTACGAGTTACATCGAGCTCGGAGATAAGAGACACATCATGGTACTCTTCTAA 906 41.17 MGSYIVYLGSHSHGLNPSAIDIQIATESHYNLLGSFLGSNEAAKEAIFYSYDRHINGFAAVLDQKNILMWYQFMKTKEENCIQHFHGTFLELRMMVQFLPTLFGVLQVSVNQQSLATLTQLIGARYFNKGYAAIAGPLNSSYETARDHEGHGTHTLSTAGGHFVEGANIFGYGNGTAKGGSPKAHVAAYKVCWPPLLFVGACFEADILAGFEAAISDGVDVLSVSLGGGSQDFVHDSIAIGAFHAVQNGITVVCSAGNSGPTPGSVSNVAPWIITVGASTIDRLFTSYIELGDKRHIMVLF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20863045 20871552 - Lsi07G014330.1 Lsi07g01433 667855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01433 301 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 70 IPR045051 -
Lsi07g01433 301 Gene3D Peptidase S8/S53 domain 113 281 IPR036852 GO:0004252|GO:0006508
Lsi07g01433 301 Gene3D - 282 297 - -
Lsi07g01433 301 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 113 294 - -
Lsi07g01433 301 Pfam Peptidase inhibitor I9 3 67 IPR010259 -
Lsi07g01433 301 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 113 294 IPR045051 -
Lsi07g01433 301 SUPERFAMILY Subtilisin-like 109 294 IPR036852 GO:0004252|GO:0006508
Lsi07g01433 301 ProSiteProfiles Serine proteases, subtilase domain profile. 1 301 - -
Lsi07g01433 301 Pfam Subtilase family 126 280 IPR000209 GO:0006508|GO:0008236
Lsi07g01433 301 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 71 IPR037045 -
Lsi07g01433 301 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 3 70 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g01433 Lsi-Chr7:20863045 Lsi07g01438 Lsi-Chr7:20932916 0 dispersed
Lsi07g01433 Lsi-Chr7:20863045 Lsi07g01434 Lsi-Chr7:20880035 3.42E-10 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01433 - - egr:104450397 327.02