Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01435 ATGGAGTTCTCTTATATTTCTCTATTGCTTTTGTTTTTCTTTTTGCTTCAAACATCTGCCATTCCTACCAAAAAGTCCTACATTGTTTATTTGGGGTCACATTCCTTTGGATCGGATCCTTCTATATATGATGTCCAACTTGCAACCGAGTCCCAATATGATATATTAGGATCAGTCATGGGAAGCAAATTGGCAGCCAAAGAATCAATTATCTACTCGTATAATAGATACATTAATGGCTTTGCTGCCGTACTTGATGAAAATGAAGCCATGGCTCTTGCAAAGAACCCAAATGTGGTGTCGGTTTTTGAAAACCAGAAAAGACAATTGCATACAACAAGATCATGGAGTTTTCTTGGGGTAGACAGTGATGCAGGAGTTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTCGGGGAAGATACAATTATAGGGAATCTCGACACGGGTGTTTGGCCAGAGTCCAAGAGCTTCAGTGATGCAGGCTATGGCCCTGTTCCTTCTAGGTGGATGGGAGTTTGTGAAGGTGGCTCCGACTTTACTTGCAACAAGAAGTTGATTGGAGCAAGATATTTCTACAAAGGATTTGAAGCTGCTAATGGTGCTATCAATGCTACCTTAAGAACTGCAAGAGACCAAGAAGGCCATGGATCCCATACTTTGTCCACTGCCGGAGGCAACTTTGTCCCCGGAGCCAATCTCTTTGGCAATGCCAATGGCACCGCAAAAGGAGGTTCCCCTAAGGCTCGTCTTGCTGCCTACAAGGTATGCTGGCCCGGTGGCCTCGATGGTGGTTGTTTTGATGCCGACGTCTTAGCCGCTTTTGAAACTGCCATTAGCGATGGTGTCGATGTTCTCTCTGTCTCTCTCGGTTCACCAGCTCGAGATTTTGCTTCTGACCCCCTTGCGATAGGAGCCTTCCATGCCGTTCAACATGGAATCGTTGTGGTTTGCTCTGGAGGAAATGACGGCCCGTCTCCTGGGACTATAACCAATGTATCTCCTTGGATATTCACGGTTGCCGCTAGTACCATCGACCGAGACTTCATCAATTATGTGACCCTCGGAAACAAGAAGCATTTCAAGGGTGCAAGTCTTTCATCCGGAGGATTACCGGGTCATAAATTCTACCCTTTGATGAATGGTGTGCAAGTAAAAGCTGCCAATGCCACTGATAACCTTGCCTTACTTTGTGAGGATGGATCACTTGATCCCACAAAGGCAAAAGGGAAGATAATACTTTGCCTTAGAGGAGACAATGCAAGAATGGATAAGGGTCTCGAGGTTCGTCGTGCCGGTGGCGTCGGTTTGATTCTTGTCAATGGCAAGGAAGATGGAACTAGCATTACAGCTGATCCTCACTTACTTCCTGCTTCTCATTTGAACTATGCTGATGGACTTGCCATCTTTCAATATGTCAACTCCACCAAAGCACCGATGGCTTTAATAACCCATGTAACGACTGAGTTGGGACTTAAACCATCTCCTATGATGGGTGATTTCTCATCAAGAGGCCCTAATCCCATCACAGACTCCATGATCAAGCCTGATATTACAGCACCGGGTGTGAGTATACTCGCATCAGTCTCCGAATCTGCACCAGCGACACAATTTCCATTTGATACGCGTCGGGTGCCTTTTAACTTTGAAACTGGTACTTCTATGGCTTGCCCACACATTTCAGGTGTTGTTGGCCTTCTCAAGACCCTTTATCCCAAATGGAGCCCCGCAGCCATCAAATCTGCCATCATGACTACAGCCAAAACAAGAGACAACTCCCATAAGTCAATATTGGACTACAACAAAGTGAAGGCAACCCCATTTAGTTATGGTGCAGGACATGTCCATCCAAACAATGCAATGAACCCTGGCCTTGTTTATGACACAACCATGGAAGATTACATGAACTTCTTATGTGCTCAGGGCTACAACTACACCGCACTTAAGAAATTCTATAACAAGCCATTCGTTTGCCCCAAATCGTTCGCAACTACAGATCTCAACTACCCATCAATCTCGGTTCCTAAGTTGACAGCCGGTGCCACCGTTACGATCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTATGTGGCAAGCGTGAAGGGTTCCTCGAAGGTCTCAGTTTCGGTCGAGCCGAGTACGTTGCAATTTAATAGTGTAGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCACTACAAAGGACAAGGACAAGGTCAAGGCCATGTGTTTGGGACATTGATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAGTGGCATTGGGATGA 2301 45.59 MEFSYISLLLLFFFLLQTSAIPTKKSYIVYLGSHSFGSDPSIYDVQLATESQYDILGSVMGSKLAAKESIIYSYNRYINGFAAVLDENEAMALAKNPNVVSVFENQKRQLHTTRSWSFLGVDSDAGVPPNSIWKAARFGEDTIIGNLDTGVWPESKSFSDAGYGPVPSRWMGVCEGGSDFTCNKKLIGARYFYKGFEAANGAINATLRTARDQEGHGSHTLSTAGGNFVPGANLFGNANGTAKGGSPKARLAAYKVCWPGGLDGGCFDADVLAAFETAISDGVDVLSVSLGSPARDFASDPLAIGAFHAVQHGIVVVCSGGNDGPSPGTITNVSPWIFTVAASTIDRDFINYVTLGNKKHFKGASLSSGGLPGHKFYPLMNGVQVKAANATDNLALLCEDGSLDPTKAKGKIILCLRGDNARMDKGLEVRRAGGVGLILVNGKEDGTSITADPHLLPASHLNYADGLAIFQYVNSTKAPMALITHVTTELGLKPSPMMGDFSSRGPNPITDSMIKPDITAPGVSILASVSESAPATQFPFDTRRVPFNFETGTSMACPHISGVVGLLKTLYPKWSPAAIKSAIMTTAKTRDNSHKSILDYNKVKATPFSYGAGHVHPNNAMNPGLVYDTTMEDYMNFLCAQGYNYTALKKFYNKPFVCPKSFATTDLNYPSISVPKLTAGATVTINRRVKNVGTPGTYVASVKGSSKVSVSVEPSTLQFNSVGEEKAFKVVFHYKGQGQGQGHVFGTLIWSDGKHFVRSPIAVALG 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20905120 20914139 - Lsi07G014350.1 Lsi07g01435 667857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01435 766 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Lsi07g01435 766 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Lsi07g01435 766 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lsi07g01435 766 Gene3D - 638 765 - -
Lsi07g01435 766 SUPERFAMILY PA domain 405 476 IPR046450 -
Lsi07g01435 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Lsi07g01435 766 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 25 766 - -
Lsi07g01435 766 SUPERFAMILY Subtilisin-like 110 625 IPR036852 GO:0004252|GO:0006508
Lsi07g01435 766 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
Lsi07g01435 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
Lsi07g01435 766 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Lsi07g01435 766 Pfam PA domain 398 469 IPR003137 -
Lsi07g01435 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 766 IPR045051 -
Lsi07g01435 766 SUPERFAMILY Protease propeptides/inhibitors 25 109 - -
Lsi07g01435 766 CDD PA_subtilisin_like 352 483 - -
Lsi07g01435 766 CDD Peptidases_S8_3 109 587 IPR034197 -
Lsi07g01435 766 Pfam Subtilase family 139 613 IPR000209 GO:0006508|GO:0008236
Lsi07g01435 766 Gene3D - 346 490 - -
Lsi07g01435 766 Gene3D Peptidase S8/S53 domain 141 634 IPR036852 GO:0004252|GO:0006508
Lsi07g01435 766 ProSiteProfiles Serine proteases, subtilase domain profile. 115 621 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g01764 Lsi-Chr4:24883208 Lsi07g01435 Lsi-Chr7:20905120 1.25E-178 dispersed
Lsi07g01431 Lsi-Chr7:20842733 Lsi07g01435 Lsi-Chr7:20905120 0 dispersed
Lsi07g01435 Lsi-Chr7:20905120 Lsi07g01437 Lsi-Chr7:20922246 4.91E-100 dispersed
Lsi08g00924 Lsi-Chr8:17636404 Lsi07g01435 Lsi-Chr7:20905120 0 dispersed
Lsi07g01434 Lsi-Chr7:20880035 Lsi07g01435 Lsi-Chr7:20905120 0 tandem
Lsi07g01435 Lsi-Chr7:20905120 Lsi07g01436 Lsi-Chr7:20918583 7.71E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01435 - - cmax:111498820 1152.12