Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi07g01436 | ATGCAGTCTTACATCGTTTACTTGGGTTCGGAATCTTCCTCTTCCTTGGATCCTTCCTCTTTATCGGAGCATTCTCAACAAGTGACGGCATTTCATTATGATTTGTTGGGATCTTTGTTGGGAAGTAAAAAGATGGCTGAGGAAGCAATGTTCTACTCCTATACTAGAAGTTTCAATGGTTTTGCAGCCAAACTTGATGAGAAAGAAGCCGCAGATCTAGCAAGTGTATGGCCAGAATCGAAGAGCTTTAGTGATGAAGGGTATGGAGGTGTGCCATCAAAGTGGAGGGGCATTTGTCAAACCGACTCTACCTTCCATTGCAATAGAAAGCTTATTGGAGGAAGATATTTCTACAAAGGATATGTAGCCAGCGGAGGCACTCTCAACGCCACTTCACTCACCGTACGCGACCACGACGGTCATGGAACTCACACTCTCTCCACCGCCGCCGGAAACTTCGTCCCCGGAGCCAACGTTTTCGGCCACGGCAACGGCACGGCCAAAGGCGGTGCTCCAAAGGCCCGCGCCGCAGCCTACAAGGTCTGCTGGCCTCCATTCTTAGACTCACAATGCTTCGACGCCGATATTCTCGCCGCCTTCGAAGCTGCCGTCGCTGATGGAGTGGACGTCATATCGACTTCCCTCGGTGGAGCTGCCGATGAATATTTCAACGATCCACTTGCTATCGCTGCCTTCCACGCCGTTCAACAAGGCGTCGTCGTCGTCTTCTCCGCTGGCAACTCCGGTCCTTTTCCGACAACCGTCACGAATATTGCCCCGTGGGAAATCACCGTGGCGGCGAGCACCATAGACAGAGATTTCGCGAGTTATGTGGCATTTGGAAATAAGAAACACATCAAGGTATATACTCATCTTTTAAGGTTTCAAAATGGAAATTAA | 900 | 49.89 | MQSYIVYLGSESSSSLDPSSLSEHSQQVTAFHYDLLGSLLGSKKMAEEAMFYSYTRSFNGFAAKLDEKEAADLASVWPESKSFSDEGYGGVPSKWRGICQTDSTFHCNRKLIGGRYFYKGYVASGGTLNATSLTVRDHDGHGTHTLSTAAGNFVPGANVFGHGNGTAKGGAPKARAAAYKVCWPPFLDSQCFDADILAAFEAAVADGVDVISTSLGGAADEYFNDPLAIAAFHAVQQGVVVVFSAGNSGPFPTTVTNIAPWEITVAASTIDRDFASYVAFGNKKHIKVYTHLLRFQNGN | 299 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 20918583 | 20922043 | + | Lsi07G014360.1 | Lsi07g01436 | 667858 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi07g01436 | 299 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 3 | 74 | - | - | |
| Lsi07g01436 | 299 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 3 | 74 | IPR045051 | - | |
| Lsi07g01436 | 299 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 75 | 283 | IPR045051 | - | |
| Lsi07g01436 | 299 | Pfam | Peptidase inhibitor I9 | 3 | 74 | IPR010259 | - | |
| Lsi07g01436 | 299 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 75 | 283 | - | - | |
| Lsi07g01436 | 299 | SUPERFAMILY | Subtilisin-like | 100 | 284 | IPR036852 | GO:0004252|GO:0006508 | |
| Lsi07g01436 | 299 | Gene3D | Peptidase S8/S53 domain | 76 | 270 | IPR036852 | GO:0004252|GO:0006508 | |
| Lsi07g01436 | 299 | Pfam | Subtilase family | 116 | 277 | IPR000209 | GO:0006508|GO:0008236 | |
| Lsi07g01436 | 299 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 299 | - | - | |
| Lsi07g01436 | 299 | Gene3D | - | 271 | 287 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi07g01436 | Lsi-Chr7:20918583 | Lsi07g01431 | Lsi-Chr7:20842733 | 1.06E-113 | dispersed | |
| Lsi07g01435 | Lsi-Chr7:20905120 | Lsi07g01436 | Lsi-Chr7:20918583 | 7.71E-118 | tandem | |
| Lsi07g01436 | Lsi-Chr7:20918583 | Lsi07g01437 | Lsi-Chr7:20922246 | 5.23E-93 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi07g01436 | - | - | bhj:120090550 | 446.432 |