Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01437 ATGAAGGTGAAGGGGAAGATAGTGATTTGCCAAACAGGGGAGATTGAAGGAGTAGAAAAGAGCTACCAAGCTGCTGGAGCTGGTGCTGTTGGAGTAATTATAGCTAATGATATTGAGAAAGGAGACGAAATTTATCCAGAATTGCACTTCATTCCAGCTTCTGATATTACCAATAACGATGCTCAATTACTCCAAAAATACCTCAAATCCACCACAAATCCAATGGCTCATTTAAGTAAGGTCAAAACACAGCTCGATATCAAACCAGCTCCACTCATTGCTACCTTCTCTTCCAGAGGCCCCAACCCAATTGATTCCTCCATTCTCAAGCCTGACATTATAGCCCCTGGTGTGAATATATTGGCTTCTTACCCCACTGGAAATGCTCCGTCGTTCTCCTCTAACGACCGACGTCGCATCCCATTTAATGTAATCTCTGGCACGTCTATGTCCTGCCCTCATATCGCCGGATTGGTATATCCAAATGATGCCATGGACCCTGGCCTTGTTTATGATACAACTATTCATGATTACTTGAACTTCTTGTGTGCTCGAGGCTACAATGCAATGGAAATCAAAAAATTCTATGCAAAGCCATTTAGTTGTGTCAAATCATTCAAAGTCACAGATCTCAACTACCCGTCGATCTCGGTTGGAGAATTGAAAATTGGTGCTCCTGTGATGATCAATAGAAGAGTTAAGAATGTGGGAAGTCCAGGCACATATGTTGCACGAGTCAAGGCATCGCCTGGAGTTTCAGTTTCGGTCGAGCCGAGCACATTGCAGTTTAGTAATGTAGGTGAAGAGAAGGCCTTCAAGGTTGTATTGCAAAACACAGGAAAAGTGAAACGAGGAGATGTGTTTGGAACATTGATTTGGTCTGATGGGAAGCATTTTTCTTACATTGTTTATTTGGGATCACATTCGCACGGGTTGAATCCTTCTGCGGTCGATCTCCAAATCGCTACAGAATCTCACTACAGTTTACTTGGATCATTGTTAGGAAGCAATGAAGCAGCCAAGGAAGCAATTTTCTACTCATACAACAGACATATCAATGGCTTTGCAGCCATTCTTGACCAGAAAGTTGCAGAAGATCTAGCAAGAAATCCTGCTGTGGCATCAGTCCATGAGAACAAGGGAAGAAAACTGCACACAACAAGTTCATGGAAATTTCTTGGAGTAGAGCATGATGATGGAATTCCTGCAAACTCTATTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGCCAACCTTGACACAGGGTATGCAGCCTATGTGGGATCCCTCAATGCAAGCTATGAAACAGCAAGAGACCATGAAGGGCATGGAACACACACTTTATCTACTGCTGGAGGCAATTTCATTTCAGAAGCTAATGTTTTTGGGAATGGTAATGGCACTGCAAAAGGAGGGTCCCCTAAAGCCCTTGTTGCTGCCTATAAGGTATGCTGGCCTCAAGTGGATTCTGGTGGTGCTTGTTTTGATGCTGACATCCTAGCAGCCATTGAAGCTGCTATTAGTGATGGAGCTGATGTTCTCTCACTTTCACTTGGTGGAGATTCCAAAGATTTTTCCGACGACATAACGGCTATCGGGGCCTTCCATGCAGTTCAACAAGGTATCGTCGTCGTTTGCTCTGCTGGAAACTCTGGACCAGCTCCAGGGACAGTAGAAAATGTGGCACCATGGCTCTTAACTGTGGGTGCTAGCACAATCAACAGACAGTTTACCAGTTATGTGGCCCTTGGAAACAAGAAGCATATCAAGGTAAAAGGGAAAATTATAATTTGTCTTAGAGGGGAAAATGCAAGAGTAGACAAAGGTTATGTGGCAGCTCAAGCAGGTGCTGTTGGAATGATTCTTGCTAACACTGAGCAAAATGCGGATGAACTTATAGCTGATGCACACCTACTTCCTGTTTCCCATGTAAGCTATACTGATGGCCAATCAATCTACCAATACATCAACTCCACCAAAACTCCAATGGCTTACATGACACATGTAAGAACAGAACTGGGAATCAAGCCAGCACCAGTTATGGCTTCATTCTCATCAAGAGGTCCCAATACAATTGAAGAGTCAATACTCAAGCCTGATATAACAGCACCTGGTGTCAATATACTAGCAGCCTACTCTGAAGATGCATCACCAAGTGGTTCATCAGTTGATAATCGTCGAATTCCGTTTAATATAGTATCTGGAACTTCCATGTCATGCCCCCACATTTCTGCTGAAACCAGAGCCAATGACTTACATCCAATACTAAACACAGGGGAGCTTAAAGCCAACCCATTTGCATATGGTGCAGGACATGTTCATCCCAACAGAGCAATGAACCCTGGCCTTGTTTATGACCTTACCACCGAGGACTACTTGAATTTCTTATGTGTTCTAGGTTACGACAAAACACAAATCAGTAAATTCTCGAATACGTCGTTCATTTGTTCGAAGTCATTCAAACTAACAGATTTCAACTACCCATCAATCTCCATACCCAACATGAAATCAGGGCCTGTGACAATCAAAAGAAGAGTTAAGAATGTGGGAAAGCCAAGCAGTTATGTTGCTAGAGTGAAGGTACCCCCAGGAGTATCAGTTTCAGTGGAGCCAAGTACATTGAAGTTTACTGGAATTGATGAAGAGAAGAGTTTCAAAGTTGTGTTGAGGAGTGTTGCAAGCAACAAGCATAGAGACTATGTATTTGGATCTTTAGCATGGGAAGATGGGAAGCATCATGTGAGAAGCCCAATTGTAGTGAATTTGGGATGA 2778 42.98 MKVKGKIVICQTGEIEGVEKSYQAAGAGAVGVIIANDIEKGDEIYPELHFIPASDITNNDAQLLQKYLKSTTNPMAHLSKVKTQLDIKPAPLIATFSSRGPNPIDSSILKPDIIAPGVNILASYPTGNAPSFSSNDRRRIPFNVISGTSMSCPHIAGLVYPNDAMDPGLVYDTTIHDYLNFLCARGYNAMEIKKFYAKPFSCVKSFKVTDLNYPSISVGELKIGAPVMINRRVKNVGSPGTYVARVKASPGVSVSVEPSTLQFSNVGEEKAFKVVLQNTGKVKRGDVFGTLIWSDGKHFSYIVYLGSHSHGLNPSAVDLQIATESHYSLLGSLLGSNEAAKEAIFYSYNRHINGFAAILDQKVAEDLARNPAVASVHENKGRKLHTTSSWKFLGVEHDDGIPANSIWNLASFGESTIIANLDTGYAAYVGSLNASYETARDHEGHGTHTLSTAGGNFISEANVFGNGNGTAKGGSPKALVAAYKVCWPQVDSGGACFDADILAAIEAAISDGADVLSLSLGGDSKDFSDDITAIGAFHAVQQGIVVVCSAGNSGPAPGTVENVAPWLLTVGASTINRQFTSYVALGNKKHIKVKGKIIICLRGENARVDKGYVAAQAGAVGMILANTEQNADELIADAHLLPVSHVSYTDGQSIYQYINSTKTPMAYMTHVRTELGIKPAPVMASFSSRGPNTIEESILKPDITAPGVNILAAYSEDASPSGSSVDNRRIPFNIVSGTSMSCPHISAETRANDLHPILNTGELKANPFAYGAGHVHPNRAMNPGLVYDLTTEDYLNFLCVLGYDKTQISKFSNTSFICSKSFKLTDFNYPSISIPNMKSGPVTIKRRVKNVGKPSSYVARVKVPPGVSVSVEPSTLKFTGIDEEKSFKVVLRSVASNKHRDYVFGSLAWEDGKHHVRSPIVVNLG 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20922246 20931820 + Lsi07G014370.1 Lsi07g01437 667859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01437 925 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 299 424 IPR045051 -
Lsi07g01437 925 ProSitePatterns Serine proteases, subtilase family, serine active site. 737 747 IPR023828 -
Lsi07g01437 925 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 424 587 - -
Lsi07g01437 925 Gene3D - 798 924 - -
Lsi07g01437 925 Gene3D - 182 304 - -
Lsi07g01437 925 CDD PA_subtilisin_like 2 76 - -
Lsi07g01437 925 Gene3D Peptidase S8/S53 domain 86 159 IPR036852 GO:0004252|GO:0006508
Lsi07g01437 925 Gene3D Peptidase S8/S53 domain 433 575 IPR036852 GO:0004252|GO:0006508
Lsi07g01437 925 Gene3D Peptidase S8/S53 domain 676 794 IPR036852 GO:0004252|GO:0006508
Lsi07g01437 925 SUPERFAMILY Subtilisin-like 385 785 IPR036852 GO:0004252|GO:0006508
Lsi07g01437 925 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 156 297 - -
Lsi07g01437 925 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 159 IPR045051 -
Lsi07g01437 925 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 424 587 IPR045051 -
Lsi07g01437 925 ProSitePatterns Serine proteases, subtilase family, serine active site. 147 157 IPR023828 -
Lsi07g01437 925 Pfam Subtilase family 419 747 IPR000209 GO:0006508|GO:0008236
Lsi07g01437 925 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 299 424 - -
Lsi07g01437 925 Pfam Subtilase family 65 159 IPR000209 GO:0006508|GO:0008236
Lsi07g01437 925 PRINTS Subtilisin serine protease family (S8) signature 736 752 IPR015500 -
Lsi07g01437 925 PRINTS Subtilisin serine protease family (S8) signature 441 454 IPR015500 -
Lsi07g01437 925 PRINTS Subtilisin serine protease family (S8) signature 413 432 IPR015500 -
Lsi07g01437 925 Pfam Peptidase inhibitor I9 300 385 IPR010259 -
Lsi07g01437 925 SUPERFAMILY PA domain 590 672 IPR046450 -
Lsi07g01437 925 SUPERFAMILY Subtilisin-like 90 159 IPR036852 GO:0004252|GO:0006508
Lsi07g01437 925 ProSiteProfiles Serine proteases, subtilase domain profile. 389 781 - -
Lsi07g01437 925 Pfam Fibronectin type-III domain 826 922 IPR041469 -
Lsi07g01437 925 Pfam Fibronectin type-III domain 210 298 IPR041469 -
Lsi07g01437 925 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 156 297 IPR045051 -
Lsi07g01437 925 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 589 746 IPR045051 -
Lsi07g01437 925 SUPERFAMILY PA domain 2 78 IPR046450 -
Lsi07g01437 925 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 159 - -
Lsi07g01437 925 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 589 746 - -
Lsi07g01437 925 CDD PA_subtilisin_like 592 666 - -
Lsi07g01437 925 Pfam PA domain 584 654 IPR003137 -
Lsi07g01437 925 Pfam PA domain 2 64 IPR003137 -
Lsi07g01437 925 Gene3D - 576 591 - -
Lsi07g01437 925 Gene3D - 592 675 - -
Lsi07g01437 925 Gene3D - 2 85 - -
Lsi07g01437 925 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 746 925 IPR045051 -
Lsi07g01437 925 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 746 925 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi03g00104 Lsi-Chr3:1444235 Lsi07g01437 Lsi-Chr7:20922246 1.21E-31 dispersed
Lsi07g01434 Lsi-Chr7:20880035 Lsi07g01437 Lsi-Chr7:20922246 0 dispersed
Lsi07g01435 Lsi-Chr7:20905120 Lsi07g01437 Lsi-Chr7:20922246 4.91E-100 dispersed
Lsi07g01437 Lsi-Chr7:20922246 Lsi07g01445 Lsi-Chr7:20991905 6.24E-64 dispersed
Lsi07g01444 Lsi-Chr7:20991793 Lsi07g01437 Lsi-Chr7:20922246 2.72E-46 dispersed
Lsi07g01436 Lsi-Chr7:20918583 Lsi07g01437 Lsi-Chr7:20922246 5.23E-93 tandem
Lsi07g01437 Lsi-Chr7:20922246 Lsi07g01438 Lsi-Chr7:20932916 1.72E-67 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01437 - - bhj:120090550 1098.96