Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi07g01453 | ATGGCTTCCACCGCAGAGGAAACAACCATCACTTTCTCCTCCTCCGACGCCACCCACGAACAAGACTATGCTTACGCTATGCAACTGGCTACCTCATCGGTGGTGCCGATGACACTCCAAGCAGCCTTTGAGCTCGGTGTGTTTGAGATATTGGCCAAGGCCGGGAATGGGGCCGAGCTCTCTTCGGCAGAGATAGCAGCTGAGATAACCACAACAAACCCCGAAGCGGCAACGATGATTGATCGGATGTTGAGGCTTCTAGCGAGCCACTCGGTGGTGGGATGTTCTTTGGCCTTTGATGAAGATGGGAATGCGCAAAGACTTTATAGCCTTGCACCAGTTTCTAACTATTATGTTCGTAATGAAGATGGTGTCTCATTAGGTCCACTTTTATCATTGCTTCAAGATGAAGTCCTTCTTCATAGCTGGACTGCGCTGAAGAATGCAGTTATTGAAGGAGGAGGTATTTTTAATAGAGCTCATGGAGGAATTCATGCCTTTGAATACCTTAGCTTGGATCCAAGATTTAACCAAGTTTTCAACACTGCGATGATAAACCACACCACTATGCCCATCAAACAAATTGTCAAGTCCTACAAAGGCTTTGCAAACATCAAACAACTAGTTGATGTTGGTGGAGGCCTCGGGGTCACCCTTCAAGTCATTACTTCTACATACCCTTCCATCAAAGGCATCAACTTCGACTTACCTCATGTCCTTCGCGATGCTCCGTCTTATCCTGGTGTGGAACATGTGGGAGGAGACATGTTTGAGAAACTTCCTAAGGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGATAATCATTGTGTAAAGTTGTTGAAAAATTGTTACACTGCGATCCCAAATGATGGAAAGGTAATCATAGTGGACTCAGTACTTCCAACAATACCTGATTCAACAAATGCAACAAAAGCCACTGCCCAATGCGATATGATTGTGATGACTCTATATCAAGGAGGAAAGGAACGAACTCAAGATGAATTCAAGGCTCTCGCAACCCAGGCTGGATTTAAACATGTCATATTCCAATGCCTTGTATCTAATCTCTGGGTTATAGAATTTTTTAAAGATTTTATACCACACCAAGATTGA | 1125 | 44.09 | MASTAEETTITFSSSDATHEQDYAYAMQLATSSVVPMTLQAAFELGVFEILAKAGNGAELSSAEIAAEITTTNPEAATMIDRMLRLLASHSVVGCSLAFDEDGNAQRLYSLAPVSNYYVRNEDGVSLGPLLSLLQDEVLLHSWTALKNAVIEGGGIFNRAHGGIHAFEYLSLDPRFNQVFNTAMINHTTMPIKQIVKSYKGFANIKQLVDVGGGLGVTLQVITSTYPSIKGINFDLPHVLRDAPSYPGVEHVGGDMFEKLPKGDAVFMKWILHDWSDNHCVKLLKNCYTAIPNDGKVIIVDSVLPTIPDSTNATKATAQCDMIVMTLYQGGKERTQDEFKALATQAGFKHVIFQCLVSNLWVIEFFKDFIPHQD | 374 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 21105962 | 21111288 | - | Lsi07G014530.1 | Lsi07g01453 | 667875 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi07g01453 | 374 | PIRSF | O-mtase | 3 | 367 | IPR016461 | GO:0008168 | |
| Lsi07g01453 | 374 | SUPERFAMILY | Winged helix DNA-binding domain | 19 | 121 | IPR036390 | - | |
| Lsi07g01453 | 374 | Pfam | Dimerisation domain | 37 | 88 | IPR012967 | GO:0046983 | |
| Lsi07g01453 | 374 | Gene3D | - | 3 | 118 | IPR036388 | - | |
| Lsi07g01453 | 374 | Gene3D | Vaccinia Virus protein VP39 | 119 | 367 | IPR029063 | - | |
| Lsi07g01453 | 374 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 27 | 367 | IPR016461 | GO:0008168 | |
| Lsi07g01453 | 374 | PANTHER | CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE | 19 | 366 | - | - | |
| Lsi07g01453 | 374 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 124 | 365 | IPR029063 | - | |
| Lsi07g01453 | 374 | PANTHER | O-METHYLTRANSFERASE | 19 | 366 | IPR016461 | GO:0008168 | |
| Lsi07g01453 | 374 | Pfam | O-methyltransferase domain | 143 | 349 | IPR001077 | GO:0008171 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi07g00322 | Lsi-Chr7:3432809 | Lsi07g01453 | Lsi-Chr7:21105962 | 3.49E-145 | dispersed | |
| Lsi07g01453 | Lsi-Chr7:21105962 | Lsi07g01455 | Lsi-Chr7:21165655 | 0 | dispersed | |
| Lsi07g01453 | Lsi-Chr7:21105962 | Lsi07g01454 | Lsi-Chr7:21149331 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi07g01453 | K13066 | - | csv:101214675 | 587.8 |