Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01455 ATGGCTTCCATGGCAGAGAAAACAACCATCGTCACTTCATCCTCCGACGATGCCGTCCAAGAACAACAACATCACGCTTATGCTATGCAGCTGGTTACCTCGTCCGTGCTGCCGATGACACTCCAAGCAGCATTTGAGCTCAGCGTGTTCGAGATCTTGGCGAAGGCTGGGGATGGGGCCGAGCTCTCTCCGGCAGAGATAGCAGCTGAGATAACCATGACAAACCCGGATGCGGCGTCAATGATTGATCGGATGTTGTGGCTTCTGGCGAGCCACTCGGTGGTGGGGTGCACTGTGGGCTTTGATGAAAATGGGAAAATGCAGAGACTTTATAGTCTTACACCGGTTTCTAAGTATTTTGTTCGTAATGAAGATGGTGTCTCGTTGGGTCCAACTTTATTGTTGATTCAAGATAAAGTCTTTTTCCATAGCTGGAGTGAGCTAAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTTAATAGGGCTCATGGGGGAGTTCATGCCTTTGAATACCCTAGCTTGGATCCAAGATTTAACCAAGTTTTCAATACTGCAATGATAAATCACACCACTACGTGCATCAAGAAAATTGTCAAATTCTACAAAGGCTTTACAAACATCAAGCAACTCGTTGATGTTGGTGGCGGTCTTGGGGTCACCCTTCAAATCATCACTTCTGCATACCCTTCCATTAAAGGCATCAACTTCGACTTACCTCATGTCATTTGCAATGCCCCGTCTCATCCTGGAAATAATTTTGATTATGATTTGACAGATGTAGAACATGTGGGAGGAGACATGTTTGAGAAAGTTCCACATGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGACGATCATTGTGTAAAGTTGTTGAAAAATTGCTACATTGCGATCCCGAATGATGGAAAGGTAATCATAGTGGACTCAGTGGTTCCAACAGTACCTGAAACCACAAATGCAATAAAATCCATAGCCCAATGCGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAGCGAACTCAAGATGAATTCAAGGCTCTCGCAACCAAAGCTGGGTTTAAACATGTCATATTTCAGTGTTTTTTATCTGATATCTGGGTTATAGAGTTTCTTAAAAATTAA 1140 43.42 MASMAEKTTIVTSSSDDAVQEQQHHAYAMQLVTSSVLPMTLQAAFELSVFEILAKAGDGAELSPAEIAAEITMTNPDAASMIDRMLWLLASHSVVGCTVGFDENGKMQRLYSLTPVSKYFVRNEDGVSLGPTLLLIQDKVFFHSWSELKNAVIEGGVPFNRAHGGVHAFEYPSLDPRFNQVFNTAMINHTTTCIKKIVKFYKGFTNIKQLVDVGGGLGVTLQIITSAYPSIKGINFDLPHVICNAPSHPGNNFDYDLTDVEHVGGDMFEKVPHGDAVFMKWILHDWSDDHCVKLLKNCYIAIPNDGKVIIVDSVVPTVPETTNAIKSIAQCDVLMMTQNPGGKERTQDEFKALATKAGFKHVIFQCFLSDIWVIEFLKN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21165655 21168380 - Lsi07G014550.1 Lsi07g01455 667877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01455 379 PANTHER O-METHYLTRANSFERASE 21 378 IPR016461 GO:0008168
Lsi07g01455 379 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Lsi07g01455 379 SUPERFAMILY Winged helix DNA-binding domain 21 124 IPR036390 -
Lsi07g01455 379 Pfam O-methyltransferase domain 145 360 IPR001077 GO:0008171
Lsi07g01455 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 376 IPR029063 -
Lsi07g01455 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 378 IPR016461 GO:0008168
Lsi07g01455 379 PIRSF O-mtase 5 378 IPR016461 GO:0008168
Lsi07g01455 379 Gene3D - 5 120 IPR036388 -
Lsi07g01455 379 Gene3D Vaccinia Virus protein VP39 121 378 IPR029063 -
Lsi07g01455 379 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 21 378 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi07g01453 Lsi-Chr7:21105962 Lsi07g01455 Lsi-Chr7:21165655 0 dispersed
Lsi07g01455 Lsi-Chr7:21165655 Lsi10g00878 Lsi-Chr10:13057073 1.48E-57 dispersed
Lsi07g01454 Lsi-Chr7:21149331 Lsi07g01455 Lsi-Chr7:21165655 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01455 K13066 - csv:101214916 564.688