Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01474 TTCCGGCCACCGTCCGGCGACTTTTCTACCCACTCTTCCCCGCCGACGTACCCTCTCATCGGCTGTCTCCTTTCCTTCTACATTAACCGCAACCGCCTCTTGGATTGGTACACTCAACTCTTGTCGGAATCCGCCACCTGCACTATCGTCGTCCGCCGCCTCGGCTGCCGGCGGACGGTGGTGACTGTGAACCCGGTTAACGTGGAGTATATTTTGACGACCCATTTCCTTAATTTCCCTAAAGGGAAGCCTTTCACTGAGATCTTGGGCGACTTTCTTGGCTGCGGCATTTTCAATGTCGACGGCGACCAATGGCGGACGCAGCGGAAGCTTGCTAGTCACGAGTTTAGCGCCAAGTCACTTCAGGAATTTGTCGTCGAGACGTTAAAGTCGGAGGTCGAGACGCGGTTGTTGCCCGCTCTCAAGGCATCGGCCGACGACGCTGCCGTCGTCGACTTACAGAAGAAACCTAATAAAGAGACAATTATCGCGCTTGAAAAGAGCTTCGACATAGCGTCGGAGGTGAGCGCCGGGCGGGCAATGGAGCCAATTTACGTGATATGGAAAATGAAGAGATGGTTTGGAGTAGGATCAGAGCGGCGGCTGAAGATGGCGGTGGCAGAAGTTCACCGGAAACATGATGAACAAAATCTTCGTTACAACAGGTTGATCTCGACCGGGCATGATGATGAAATGATCCGAGACATGGTCATAAGCTTCATCATGGCGGGTCGAGACACGACTTCAGCTGCAATGACATGGCTGTTTTGGCTACTCTCCCATCATCCCAACATAGAGAATCAATTAGTAGAAGAGATAGACTTAGAATCAGCATCATCAGTTGAAAAAAAATTGGACTACCAATCTCTGAAGGAGCTCAAATTTCTCAAGGCATGCCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGATTCCAAGCATGCCATTGTCGACGACTACTTGCCCGACGGGACTCTGGTCCGGTCTGGAGATAGAGTGACATATTTCCCGTACGGGATGGGTAGAAGGGAGGCTTTGTGGGGGAAGGATCGGTTTGAGTTCAAGCCAAGCCGATGGCTTCTCGAACACGATGGGCGTGGTGACCGGAGAAAAGGGGTGAAATTGGTGAGTCCATACAAGTTTCCAATATTTCAAGCTGGGCCAAGGGTGTGTTTAGGGAAGGAGATGGCTTTCCTTCAGATGAAGTATGTGGTGGCTTCAATTCTAAGCCAATTCAGAATCAAACCTATTGCCGGCGACCGCCCTGTGTTTGTGCCGCTGTTGACGGCGCACATGGCCGGCGGCTTCAAGGTTTTGATTCAAAGGAGAGAGAAAGAGGACAGAGAAAGAGGCAATTTAAGACAAACAAACAAAATTCCTAATTTATACAATCAGAAGAAGAGT 1410 50.35 FRPPSGDFSTHSSPPTYPLIGCLLSFYINRNRLLDWYTQLLSESATCTIVVRRLGCRRTVVTVNPVNVEYILTTHFLNFPKGKPFTEILGDFLGCGIFNVDGDQWRTQRKLASHEFSAKSLQEFVVETLKSEVETRLLPALKASADDAAVVDLQKKPNKETIIALEKSFDIASEVSAGRAMEPIYVIWKMKRWFGVGSERRLKMAVAEVHRKHDEQNLRYNRLISTGHDDEMIRDMVISFIMAGRDTTSAAMTWLFWLLSHHPNIENQLVEEIDLESASSVEKKLDYQSLKELKFLKACLCETMRMYPPVPWDSKHAIVDDYLPDGTLVRSGDRVTYFPYGMGRREALWGKDRFEFKPSRWLLEHDGRGDRRKGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYVVASILSQFRIKPIAGDRPVFVPLLTAHMAGGFKVLIQRREKEDRERGNLRQTNKIPNLYNQKKS 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21464729 21468702 - Lsi07G014740.1 Lsi07g01474 667896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01474 470 PRINTS E-class P450 group I signature 252 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS E-class P450 group I signature 232 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS E-class P450 group I signature 393 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS E-class P450 group I signature 383 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 SUPERFAMILY Cytochrome P450 13 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PANTHER CYTOCHROME P450 163 445 - -
Lsi07g01474 470 MobiDBLite consensus disorder prediction 449 470 - -
Lsi07g01474 470 Gene3D Cytochrome P450 9 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 12 154 - -
Lsi07g01474 470 Pfam Cytochrome P450 14 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 Pfam Cytochrome P450 228 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 163 445 - -
Lsi07g01474 470 PRINTS P450 superfamily signature 384 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PRINTS P450 superfamily signature 243 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lsi07g01474 470 PANTHER CYTOCHROME P450 12 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi05g00982 Lsi-Chr5:17155109 Lsi07g01474 Lsi-Chr7:21464729 5.74E-124 dispersed
Lsi07g01474 Lsi-Chr7:21464729 Lsi03g01632 Lsi-Chr3:27454110 6.10E-39 dispersed
Lsi06g01637 Lsi-Chr6:26666402 Lsi07g01474 Lsi-Chr7:21464729 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01474 K20665 - csv:101207598 751.125