Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi07g01500 ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAGGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCTCAGGATGATGTAGTAAACGATATGAAAGAGGCAGCATCAAAGGAACTTTTGAATGTAAGCCAAAATGAACATGTCTACAAAAATCTTTTGAAGGATCTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAAGTGACGTCCATTTGGTGGAGTCTGTGCTTGGTTCAGCAGCTGTTGAATATGCAGAGAAAGCACAAGTTCATGAGCCAGAGATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGGTCTTTTTTGGTATTCTTTCCTTCTAATCTTTACCATTTTTTCATATACAAAGTTCCTGCTTCTTTTCTTACGATTGCAGATTGTACCTTTTACACACGACATATTTTACAATTTGCATACCCTTGTATTCTCTGGAGGTGTGGTATTGGCATCTCGAGATGGGAAAATTGTCTGTGAGAACACCCTTGATGCTAGATTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGCTGCATTTCTCATTGGCAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGATGGATTGGATTCGTCTCTATCATGTTACAATGTTCTTGGTTCGAGCTCTACGGGGAGGTAGGTGCCCTTATCGTCTCGATAGTATCTCCGGTATCAATAATGTTCCAGCTTGA 942 43.1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNDMKEAASKELLNVSQNEHVYKNLLKDLIVQSLLRLKEPAVLLRCRKSDVHLVESVLGSAAVEYAEKAQVHEPEIIVDHVHLPPGPSHHHHHGLFWYSFLLIFTIFSYTKFLLLFLRLQIVPFTHDIFYNLHTLVFSGGVVLASRDGKIVCENTLDARLDVVFRKKLPELHFSLADPKKPFQSSCCMMDWIRLYHVTMFLVRALRGGRCPYRLDSISGINNVPA 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22111001 22115085 + Lsi07G015000.1 Lsi07g01500 667922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi07g01500 313 Coils Coil 38 61 - -
Lsi07g01500 313 Gene3D - 92 271 IPR038495 -
Lsi07g01500 313 Pfam ATP synthase (E/31 kDa) subunit 225 260 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lsi07g01500 313 Pfam ATP synthase (E/31 kDa) subunit 16 169 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lsi07g01500 313 SUPERFAMILY V-type ATPase subunit E-like 87 261 - -
Lsi07g01500 313 Gene3D - 1 62 - -
Lsi07g01500 313 PANTHER BNAC03G72900D PROTEIN 1 183 - -
Lsi07g01500 313 Hamap V-type proton ATPase subunit E [atpE]. 8 265 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lsi07g01500 313 PANTHER BNAC03G72900D PROTEIN 221 273 - -
Lsi07g01500 313 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 183 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lsi07g01500 313 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 221 273 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi07g01500 K02150 - csv:101217221 379.407