Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi08g00009 | ATGGAAAGTGCTTTATGCGATGATCAATGCTTGGGGCGATGCTTGTACATCCATGGTGTTCCAGGAACAGGCAAGACAATGAGTGTGCTGTCAGTAATGAGGAACTTGCGGGCTAAAGTTGATGCAGGAAATATAAGGCCTCATTGCTTTGTGGAGGTTAATGGTCTAAAACTGGCAGCACCAGAAAATATATACAGGGTTATACATGAAGCATTAACTGGGTATAGGGTTAATTGGAAAAAGGCGCTTCAGTTGTTGACCAAACGGTTTTCAGATGTAAATAATTGCAGGGATGATGAGCGACCTTGCATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCAGTTCTATACAACATTCTTGATTGGCCTACAAAGCCACAAGCAAAGTTGATTGTGATAGATCTATTAGAGCTTCATCCAGGATCTATCTACCATCCGGACAGTCCCTTGGAGCATGCAATAGTGCTTTATCAAACCTTTAGAGCACAGTGA | 507 | 41.62 | MESALCDDQCLGRCLYIHGVPGTGKTMSVLSVMRNLRAKVDAGNIRPHCFVEVNGLKLAAPENIYRVIHEALTGYRVNWKKALQLLTKRFSDVNNCRDDERPCILLIDELDLLVTRNQSVLYNILDWPTKPQAKLIVIDLLELHPGSIYHPDSPLEHAIVLYQTFRAQ | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 230330 | 232151 | + | Lsi08G000090.1 | Lsi08g00009 | 667935 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi08g00009 | 168 | PANTHER | ORIGIN RECOGNITION COMPLEX SUBUNIT 1 | 2 | 138 | IPR020793 | - | |
Lsi08g00009 | 168 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 11 | 136 | IPR027417 | - | |
Lsi08g00009 | 168 | SMART | AAA_5 | 11 | 165 | IPR003593 | - | |
Lsi08g00009 | 168 | Gene3D | - | 1 | 140 | IPR027417 | - | |
Lsi08g00009 | 168 | PANTHER | CELL DIVISION CONTROL PROTEIN 6-RELATED | 2 | 138 | - | - | |
Lsi08g00009 | 168 | Pfam | ATPase family associated with various cellular activities (AAA) | 15 | 138 | IPR003959 | GO:0005524|GO:0016887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi08g00009 | Lsi-Chr8:230330 | Lsi10g01424 | Lsi-Chr10:18342365 | 9.33E-07 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi08g00009 | K02603 | - | csv:116404379 | 276.944 |