Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi08g00157 | ATGGTTACTGCAGCGGTTGAGAATGGCGGAAGCGAAATGGTAATTGACGGTAACGAACAGAAGCCGAAGAACATTGTGTCTGATGGGTTCGATGCCAATTATCTCAAAATTTACTACGGGAAGCTTTTTCCGTATGCTGATTTTTTCAAATGGATGTCTTATGGAAATGATGACTTTGGATTTAACCACATTCTATGGGTATTTAGTGGTCGGCGTGGTGTTCATTGTTGGGTTTGTGATGGCAAAGCTAGAAGGTTGTCTAACGAACAGCGAGCTGCCATTGCTGAATATTTCCATTTATACCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCAGTTCTTCATCCATTTCTTGCGAGATCGTACATAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTCTATAGTCAAAAGATTTTCTCTACTGAGGAAAGATATGAGAAAATATTAGATATGATTCATGATGAATCCATTACCTCAGAGCTTCGAGGAAGGTGGCAAGATAATAGGCGACCCTCTAAAAATGATGTCAACTCAGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTATCCTAGGCTTGATTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATTTGTGTCCCTATCGACCCTGAAAACTGTGATAAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGGTAAAACAACAAGAAGGCATATAG | 777 | 40.28 | MVTAAVENGGSEMVIDGNEQKPKNIVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESQLLYSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNSAQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPENCDKFDPTTVPTVAQVKQQEGI | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3232245 | 3237437 | - | Lsi08G001570.1 | Lsi08g00157 | 668083 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi08g00157 | 258 | SUPERFAMILY | Prim-pol domain | 57 | 253 | - | - | |
Lsi08g00157 | 258 | Pfam | DNA primase small subunit | 56 | 234 | IPR002755 | GO:0003896|GO:0006269 | |
Lsi08g00157 | 258 | PANTHER | DNA PRIMASE SMALL SUBUNIT | 26 | 55 | - | - | |
Lsi08g00157 | 258 | PANTHER | DNA PRIMASE SMALL SUBUNIT | 26 | 55 | IPR014052 | GO:0003896|GO:0006269 | |
Lsi08g00157 | 258 | PANTHER | DNA PRIMASE SMALL SUBUNIT | 57 | 253 | IPR014052 | GO:0003896|GO:0006269 | |
Lsi08g00157 | 258 | PANTHER | DNA PRIMASE SMALL SUBUNIT | 57 | 253 | - | - | |
Lsi08g00157 | 258 | Gene3D | DNA primase, PRIM domain | 56 | 256 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi08g00157 | Lsi-Chr8:3232245 | Lsi08g00158 | Lsi-Chr8:3246858 | 7.14E-25 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi08g00157 | K02684 | - | csv:101203146 | 379.793 |