Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lsi08g00608 | GCGTTAACTCAAAAACAATTTGATTCCAAATCCCAGAAATCATCTCTTCATTTTGACGACGAATTCGATACCTTCAAATTGAAATCCGTTGCTGAATCTCTGAGATCGGCTACATCTTGTGAAACTTTGATCAATTCGAAGTATTCGAGTCGATTAAGTAGTTCGATGGCTATGGGACTGGAGGAGGAATCGGAGAGGAAGGGCGGCGTAGCGCTGTATTTTCCGGCAAATGACGACGAGCCTTCGTCGGCATCGTCTTCTACTCCTCCTAGGCTGCCTCGCAGGCTTCGCCGTCGCCTAATGGAGTCTAAAGCGCCGTCTACTGCTGAAGAGATTGAAGCCAAGCTCCAGAAGGCTGATCTCCGTCGTCAGGCGAAGAGGCAAAGAGCTGGGTTTTTGATGGAGAGAAGAAGAACATGTGATATTGTTCATGCTAATATAAAAGGGATGCCTAAGCAGGACCCATCGGCAATTATAGCAAGTCTGTTAAGTCAAGAATCTGTGAAGTCAATGGAATTTGAGCAGCTTGCTTCTAAGATCAATGCAACTGCAACCATACAAACTGTAAGAGCTTTACTAGTTCGCATAGAGAGCCGATTTACGTTCTTGAAAACAACTTCTGGAAATAAATTAAGCTTTGAGAAGGTAGATCATCTTCTCAAGCGTGTTGGACTGCATGGCAGAAGCAGTAATCAAGTAACCAAGACAAGTAGGTCAGAGACTATTGGCTCGAGGAAAGCTGCAAAGGTTGCCTCTAAATTATCTAGATACCCTGCTAAAGTAGTGCTTTTTGCTTACATGATACTGGCGCATCCGGAGACAGTTTTTATTGGGAAGAGTGAGGTTGAAAATGCACTGCTGGAGTCAGCATCAAATTTTGTTCAGGAATTCGAGTTGTTGATTAAGGTTATATTAGAGGGTCCCTTTAGAACCTCTCATGAGGAGCAATCTTCCACACCACCTTCGTTTAGATCCCAGTTGGAGATATTTGACAAAAGATGGTGCTCTTACCTTCATCACTTTGTCGTGTGGAAAGACAAGGATGCTATATTTTTTGAGGAAAATATGAAGGGTGTTGCTCGTCAGTTGGAGCTTTTTATGGCGCAAACTTCTAAGCTGAGATTGGAAGGTGATAATGGTAATATCGCACATGATATACAGGTCAATGAGGAGCAGAAGATGCTGAGAGAAAAGTTACAGCAACTTGGGAGTTCAGAAAATTCTTTATCAGTTGCTGAGTCAAGCTCCTCAGAATTGGATACTGAATATTCTACAGGGTTCCGACAATCAGAAAGTTCCAAGTCAGAGCAACGCACAAGCTCCAGTGAAATGCTAGTCACTGAGAATGAGTTAGTTGCAAATGAGATTGTCCATGACTATCACCATTTCCTTACGGTCACCTCGAATGTTCCAACTGAAGCTGAAACCAGTTTAAAGGCAAAATTGAAAAAGACAATGGAAAAAGCATTTTGGGATGGCATCATGGAATCTATGGAAGAAGATGAGCCTGATTACAGCTGGGTTGTCAAGGTCCTGAAAGAGATCAGGGATGAATTGTGTGAGATGTCTCCGCTGTCCTGGAGATCAGAGATTGCTGAGAAAATTGATATTGAAATTCTAGCGCAGATTCTAAATTCAGGGACCCTGGATGTGGGTTATTTCAAACAACTTCTGGAATTTTGTTTAGTCACTCTGCGAAAACTTTCTGCCCCAGCTAAAGAGAAAGAGATGGAAGTGAGTTACCAGAAGCTGATGGAAGAGCTAGGAGACGTTTCCTGTTCTGGAGAGAACTCAAAGCGTTCATTTTCTCTCTTGATGGTCAAAGGTTTACGCTTTGTTCTACATCAGATTCAGAATCTAAAAGAAGAAATTGCAAATGCACATTTAAAGATGGTGGAACCACTCATCAAGGGCCCTGCTGGTTTGGAGTATCTAAGAAGTTCATTTTCTAAGCGATGTGGATCTCCTACTGATGCCCCTACCTCTTTACCCCTTACAAGGCAATGGCTTTCATCTGTATGGCCGGAAGTGGAGTTGGAGTGGAAAGAATACGCTGATTCTGTGGCTGCTGCTATGTCAAAAAATGCAGTTCAGCCAGAGATCCTTCCGTCTACCATACGAACTGGAGGAAGCTCAAAGATCAGCCCGACATCTGGAATAATAAATCAAATAACGGGGCTCAGCCATGATACTCTGCCGGAGACTCTTAAGCTTAATCTCGCCAGGCTCAGGATGGTACAGTCTCGACTTCAGAGAATCATCGTCATTTCTACCAGCTTGTTGGTCATGCGTCAAATTCTTCTCAACGAGAGATTGGTCTCCAGTCCAGTCGAAGTCGATAGTATATTATCAACATGCGCCAAACGTCTCTGCAACCTCTTGGACACTGTAGAAAATGCAGGAATACTGGAGATCGTCGAAGCCATCAGTAGTGTATTAGTTGATCGCGATTCAGATCCTGAAAAACTCCAGTCAAGAAAGCAGATCATAGCAAACATGTTGATAAAAAGTTTACAAGAAGGTGACGTCATATACACTCGAGTTTCACGCAACATTTATTTGGCCATGCGAGGCGTTGTGCTCGGAGGAAGTGGTAGAAAGGGAAGGCAACAGGTGGAAGTGGCTCTTTTGCCCATCGGAGGCGGAGCACTTATAGAAAAGGTGATTGAGGCAGCAGAAGTTCTGGTTGCGATGGCTGTTGTGTCTGAAAAAAGGAATAAACCATTAACAAACTACAAAACAACATCTTTATACACAAGCAAAATGAATTTTCAATGTAAAAACGTAAAGAATGCATTGAATTTGTTGCTCAATAATTCCACTTTTACCCTCCGCAACGACTTCACTTCACACAGACGTTTTCACCAATTTCTCTCTCTTTTCTCTCTCTCCGGAGAGAGAAATCCTGCCGGCGACCGCCATTTCCGACCAACCATGCTCTTGAAGCCCTTCAACACCGTCGCCGTCGTATTCATGCTCGCTTTCGCATTCTTCATCATCTTCTTCACTGGCTTCCTCGAATTTCCACCGGCATCGACTTCCATCGTACCGTCCACCGACGATCTGAATCTCTCCGCAGCCGAATTCGCTTCCGACCCTTTCACTGATTTGATCACCGCCTTTAAGAAATGGGACTCTCAGGTGGGTTGTGATCGGTTCCGGGAGAAAATTGGCGGCGGTTTGAGCAATGGGTCTTTGTCGGTTTCGCTGCAGCAAGTCGGCGGCGACTCTAATTCGGAATGCGGGGGGCTGAAACTGAATCATGTTGCTGTTTTGGTGAAAGGATGGACTTGGATTCCTGATAATTTAGATAATTTGTATTCGTGTTCCTGCGGATTGAGCTGTCTTTGGACTAAAGCTTCTGTTCTTGCTGATAAACCTGACGCCTTGTTCTTTGAAACCAGTACGCCTCCTCGGCAGTTTATCTTAAATCCGTTCTTCGACCGTGGAGATGAAGATTGCAGGGAAGTTAAGTTCAATGGTGGTTGGGATGTGGCCGTAGGAGATCCTCTTCGCATATATATGGATCTCGAGGCTGGTCGGAAGCGCTCAGGTTTTGAGGATCTATTTGTTAGTTATCATGCAGAAGATGATGTTCAGTCAACTTATGCAGGAGCACTCTTTCACAACAGTCGAAACTATCACGATACACTTGTTTATTGGTCGTCGTCTCGTTGTCTTCCCCAAAGAAATCAGCTTGCTAGGAAACTTCTAAGCTTGCTGCCCCACCATTCATTTGGCAAGTGCTTGAACAACGTAGGCGGCCTCGATATGGCCCTTTCGATGTACCCTGAATGTGCAAATGATGCCAGTGTCACCCCGAAATGGTGGGATCACTTGCATTGTGCAATGTCTCAATACAAATTCATTCTCGCAATTGAAAACACAATGACTGAGAGTTACGTAACGGAGAAGCTATTTTACGCGCTAGACTCTGGTTCGGTTCCGATCTATTTTGGTGCCCCTAATGTCTGGGACTTTGTTCCTCCACATTCTATAATTGATGGGTCTAAATTCAGCTCCTTGGAAGAGTTAGCTTCTTACGTGAAGCGACTTGCGGATGATCCAGTAGCTTATGCTGAGTACCATGCTTGGAGACGATGTCGTGCATTGGGTAACTATAGAAGGACCCGAGCTGCGAGCCTTGACACGCTGCCATGTCGGTGGGATGAGTTTGCTGTACAAGGAAATGAATTTAGAGCAGGCGGGAGTTCGCTTAGTTTCGAGGTTTGTGAGAAAAATGGGAGGCGACAACTTCTTCTTCTTCTTCTCTACAAAGCCATGAAACTGCTTCTCTCTTTCAAATCACCTCTGAAACTTCACGCTCTCATTCTTCCTTCACTCTCTTTCCACACTTCCTTCTTCAACTTTTCAACTCCTCTCCCTGCCCTCAAATTCCCCACAACCAGACCCCCATCCATTCCTTCTCCAAAATCAATGGCCACCTCAATCTCTTCCCCGAAACCACTGGTTCAAGTCAAGGACACCATCGAACTCACTGAAATCGAGGAGAAGATTTTTCATAGGCTTCTCGGGACTCTTCGTCACTTCAATCTCCAAACCCAGCTTCGTGTTGCCGGCGGTTGGGTTCGCGATAAGAATTTAGGAACTATTTCGTGGGGTTTTGGAGATTTCTTTAATTTCATCGGGCTTCTCGGCAAAGATTGTTACGACATTGATATCGCTCTAGACAATATGTTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTGGACAGTTGGGGAAGAAGCGCAAGGAGTCGCTGTTATTCCATGGTATGAGAATCATGTTAACCCTGACCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTAAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGTATTCCTACTAAGCAAAAGTTTGGGACGGCAGAAGAGGATGCGTATAGAAGGGATTTAACAATCAATAGCTTGTTCTACAATATCAACTTGAGCATAGTTGAAGATTTTACAAAAAGAGGCATTTCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTGCTAAAGCTACATTTATGGATGATCCACTTCGAGTCCTTCGAGCCATACGTGCAAGATTTGAATTCACATTGGACGAAGAACTGAAAGAAGCTGCAGCATGTGAAGAAGTAAAGGCTGCTCTTGCTGCAAAGATTAGCAGAGAACGTATTGGAGTTGAAATTGATCTCATGATTTCTGGGAATCAGCCAGTTAAAGCAATGGGCTACATTTGTGATTTGACTTTATTTTGGACCGTCTTTACTCTTCCTTCTAACACTGAACCTGAAATATCTGAGGTGTGTAATAGAACAAGAAAATTGAGACAAACCAATGCTTCTTATTTAATGAATATATACAGTTCTACCATATTCCTTATGGTTCATCCTAAAAAACTTGGTCTCTGTCTCTCTCTCTCTCATGTTTTTGGGCTTTGCATTGCTTGTGTAGATGCCACGTGGAACCTCATTCCACACATCAAATGCTTTACCTTTAATGACGAACAGAAAAGACTCTCTATGTATGCTTCTCTCTTCCTTCCATTCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGATATTCTTGTCTGCTTCAAACTCCGAATCTTCTGCCCTACAGATTCCTGTTGAAATTCAACCCAATGGACTTGATTGGGGTGTTGATTGTGCAGATGTTCCTGTTACGTCAAGGATTCGAGTATTGACGGGGCTTCTTTTGCGGGAAATTAAAGACTTTTGGCCTGTTGCTTTATTGATGGCCACCTTGTTATATCCTGCTAGTGTAGATTATACACAAGATCTGTTAAACAGACACTTCGAACTGGAAAAGCGAAAAGAACTGTTTGACGTCGTTTACAACGAGATTGTTAAATTAGGTATAAACCCAAAAGCTGCTCAGCGAAGCATTATGAAAACAATGCGTTTCCTCGTTCAATCTTTGGCCTCTAACCCTTCTCCTCGGGCACGGCCATGTTTTCAGCAACAAAAAATACTTGCATGGCAGCTTGCACACCCCTCAGCAACATCCGAAGAATGCATCGATTGGATTCGGGAAATGAATTCGAAGCGTGTGCACATAAAGAAAAGATTCATGAAGGAATATAGAGATACAAATGATATTTTGAACCTTGAAATTGTTTTG | 6186 | 43.31 | ALTQKQFDSKSQKSSLHFDDEFDTFKLKSVAESLRSATSCETLINSKYSSRLSSSMAMGLEEESERKGGVALYFPANDDEPSSASSSTPPRLPRRLRRRLMESKAPSTAEEIEAKLQKADLRRQAKRQRAGFLMERRRTCDIVHANIKGMPKQDPSAIIASLLSQESVKSMEFEQLASKINATATIQTVRALLVRIESRFTFLKTTSGNKLSFEKVDHLLKRVGLHGRSSNQVTKTSRSETIGSRKAAKVASKLSRYPAKVVLFAYMILAHPETVFIGKSEVENALLESASNFVQEFELLIKVILEGPFRTSHEEQSSTPPSFRSQLEIFDKRWCSYLHHFVVWKDKDAIFFEENMKGVARQLELFMAQTSKLRLEGDNGNIAHDIQVNEEQKMLREKLQQLGSSENSLSVAESSSSELDTEYSTGFRQSESSKSEQRTSSSEMLVTENELVANEIVHDYHHFLTVTSNVPTEAETSLKAKLKKTMEKAFWDGIMESMEEDEPDYSWVVKVLKEIRDELCEMSPLSWRSEIAEKIDIEILAQILNSGTLDVGYFKQLLEFCLVTLRKLSAPAKEKEMEVSYQKLMEELGDVSCSGENSKRSFSLLMVKGLRFVLHQIQNLKEEIANAHLKMVEPLIKGPAGLEYLRSSFSKRCGSPTDAPTSLPLTRQWLSSVWPEVELEWKEYADSVAAAMSKNAVQPEILPSTIRTGGSSKISPTSGIINQITGLSHDTLPETLKLNLARLRMVQSRLQRIIVISTSLLVMRQILLNERLVSSPVEVDSILSTCAKRLCNLLDTVENAGILEIVEAISSVLVDRDSDPEKLQSRKQIIANMLIKSLQEGDVIYTRVSRNIYLAMRGVVLGGSGRKGRQQVEVALLPIGGGALIEKVIEAAEVLVAMAVVSEKRNKPLTNYKTTSLYTSKMNFQCKNVKNALNLLLNNSTFTLRNDFTSHRRFHQFLSLFSLSGERNPAGDRHFRPTMLLKPFNTVAVVFMLAFAFFIIFFTGFLEFPPASTSIVPSTDDLNLSAAEFASDPFTDLITAFKKWDSQVGCDRFREKIGGGLSNGSLSVSLQQVGGDSNSECGGLKLNHVAVLVKGWTWIPDNLDNLYSCSCGLSCLWTKASVLADKPDALFFETSTPPRQFILNPFFDRGDEDCREVKFNGGWDVAVGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNSRNYHDTLVYWSSSRCLPQRNQLARKLLSLLPHHSFGKCLNNVGGLDMALSMYPECANDASVTPKWWDHLHCAMSQYKFILAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLADDPVAYAEYHAWRRCRALGNYRRTRAASLDTLPCRWDEFAVQGNEFRAGGSSLSFEVCEKNGRRQLLLLLLYKAMKLLLSFKSPLKLHALILPSLSFHTSFFNFSTPLPALKFPTTRPPSIPSPKSMATSISSPKPLVQVKDTIELTEIEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKNLGTISWGFGDFFNFIGLLGKDCYDIDIALDNMLGSEFVDKVREYLWTVGEEAQGVAVIPWYENHVNPDQSKHLETARMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMISGNQPVKAMGYICDLTLFWTVFTLPSNTEPEISEVCNRTRKLRQTNASYLMNIYSSTIFLMVHPKKLGLCLSLSHVFGLCIACVDATWNLIPHIKCFTFNDEQKRLSMYASLFLPFRKFTFKDKKSKKIFLSASNSESSALQIPVEIQPNGLDWGVDCADVPVTSRIRVLTGLLLREIKDFWPVALLMATLLYPASVDYTQDLLNRHFELEKRKELFDVVYNEIVKLGINPKAAQRSIMKTMRFLVQSLASNPSPRARPCFQQQKILAWQLAHPSATSEECIDWIREMNSKRVHIKKRFMKEYRDTNDILNLEIVL | 2062 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 14384684 | 14406476 | - | Lsi08G006080.1 | Lsi08g00608 | 668534 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lsi08g00608 | 2062 | Gene3D | - | 1177 | 1374 | IPR038577 | - | |
| Lsi08g00608 | 2062 | PANTHER | - | 721 | 903 | - | - | |
| Lsi08g00608 | 2062 | PANTHER | - | 63 | 125 | - | - | |
| Lsi08g00608 | 2062 | Gene3D | Beta Polymerase, domain 2 | 1491 | 1679 | IPR043519 | - | |
| Lsi08g00608 | 2062 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 1078 | 1379 | - | - | |
| Lsi08g00608 | 2062 | Pfam | Glycosyltransferase family 10 (fucosyltransferase) C-term | 1216 | 1370 | IPR001503 | GO:0006486|GO:0008417|GO:0016020 | |
| Lsi08g00608 | 2062 | CDD | NT_ClassII-CCAase | 1509 | 1679 | IPR002646 | GO:0003723|GO:0006396|GO:0016779 | |
| Lsi08g00608 | 2062 | PANTHER | - | 163 | 427 | - | - | |
| Lsi08g00608 | 2062 | Pfam | T-complex protein 11 | 453 | 904 | IPR008862 | - | |
| Lsi08g00608 | 2062 | Pfam | Poly A polymerase head domain | 1523 | 1683 | IPR002646 | GO:0003723|GO:0006396|GO:0016779 | |
| Lsi08g00608 | 2062 | MobiDBLite | consensus disorder prediction | 73 | 95 | - | - | |
| Lsi08g00608 | 2062 | PANTHER | TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 | 721 | 903 | IPR008862 | - | |
| Lsi08g00608 | 2062 | PANTHER | TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 | 432 | 712 | IPR008862 | - | |
| Lsi08g00608 | 2062 | PANTHER | TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 | 63 | 125 | IPR008862 | - | |
| Lsi08g00608 | 2062 | Coils | Coil | 610 | 630 | - | - | |
| Lsi08g00608 | 2062 | SUPERFAMILY | Nucleotidyltransferase | 1502 | 1679 | IPR043519 | - | |
| Lsi08g00608 | 2062 | MobiDBLite | consensus disorder prediction | 406 | 443 | - | - | |
| Lsi08g00608 | 2062 | PANTHER | TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 | 163 | 427 | IPR008862 | - | |
| Lsi08g00608 | 2062 | PANTHER | - | 432 | 712 | - | - | |
| Lsi08g00608 | 2062 | Gene3D | - | 1682 | 1871 | - | - | |
| Lsi08g00608 | 2062 | Coils | Coil | 109 | 129 | - | - | |
| Lsi08g00608 | 2062 | SUPERFAMILY | Poly A polymerase C-terminal region-like | 1683 | 1775 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lsi08g00608 | K14412 | FUT13, FucTC; alpha-1,4-fucosyltransferase [EC:2.4.1.65] | - | csv:101211164 | 1345.1 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lsi03g00847 | Lsi-Chr3:13403487 | Lsi08g00608 | Lsi-Chr8:14384684 | 2.29E-54 | dispersed | |
| Lsi05g00214 | Lsi-Chr5:2924983 | Lsi08g00608 | Lsi-Chr8:14384684 | 2.33E-12 | dispersed | |
| Lsi08g00608 | Lsi-Chr8:14384684 | Lsi03g00496 | Lsi-Chr3:5700301 | 5.04E-13 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi18g1243 | . | . | . | . | . | . | . | . | Cmo04g02550 | . | . | . | . | . | Sed11g1334 | . | . | Bhi04g01803 | Tan11g1171 | Cmetu03g1357 | . | Hepe02g2779 | . | Lcy10g1329 | Cla08g00676 | Cam08g1106 | Cec08g0691 | Cco08g0800 | Clacu08g0812 | . | Cre08g0616 | . | . | Cone17ag0795 | Cone20ag0392 | . | . | . | Cme03g01094 | Blo17g00218 | Blo18g00217 | . | Bda13g01526 | Bpe02g01604 | Bpe14g00335 | Bma01g00866 | Bma02g00276 | . | . | . | . | . | Car04g02347 | . | Cpe01g02106 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi08g00608 | . | Chy03g00543 | . |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Lsi04g00398 | . | 100 | 565 | Xyloglucan Fucosyltransferase1 | AT1G14080 | 57.3 | 9.0e-158 | 553.9 | |
| Lsi02g00086 | . | 113 | 582 | Xyloglucan Fucosyltransferase1 | AT1G14080 | 54.5 | 6.3e-151 | 531.2 | |
| Lsi07g00815 | . | 56 | 502 | Xyloglucan Fucosyltransferase1 | AT1G14080 | 50.6 | 5.2e-129 | 458.4 | |
| Lsi04g00398 | . | 80 | 566 | Xyloglucan Fucosyltransferase1 | AT1G14100 | 57.7 | 1.4e-163 | 573.2 | |
| Lsi02g00086 | . | 115 | 582 | Xyloglucan Fucosyltransferase1 | AT1G14100 | 58.0 | 2.9e-161 | 565.5 | |
| Lsi07g00815 | . | 56 | 505 | Xyloglucan Fucosyltransferase1 | AT1G14100 | 50.9 | 1.8e-134 | 476.5 | |
| Lsi04g00398 | . | 101 | 570 | Xyloglucan Fucosyltransferase1 | AT1G14110 | 53.7 | 1.0e-136 | 483.8 | |
| Lsi02g00086 | . | 112 | 585 | Xyloglucan Fucosyltransferase1 | AT1G14110 | 51.2 | 1.7e-131 | 466.5 | |
| Lsi05g00214 | . | 1 | 503 | Xyloglucan Fucosyltransferase1 | AT1G49710 | 62.0 | 7.3e-181 | 630.6 | |
| Lsi03g00496 | . | 1 | 472 | Xyloglucan Fucosyltransferase1 | AT1G49710 | 56.8 | 1.5e-146 | 516.5 | |
| Lsi08g00608 | . | 985 | 1388 | Xyloglucan Fucosyltransferase1 | AT1G71990 | 64.0 | 2.5e-152 | 535.4 | |
| Lsi04g00398 | . | 6 | 566 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 56.0 | 9.5e-182 | 633.6 | |
| Lsi02g00086 | . | 117 | 584 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 59.7 | 7.8e-168 | 587.4 | |
| Lsi07g00815 | . | 55 | 511 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 50.1 | 3.8e-130 | 462.2 | |
| Lsi04g00398 | . | 36 | 566 | Xyloglucan Fucosyltransferase1 | AT2G03220 | 63.4 | 1.4e-198 | 689.5 | |
| Lsi02g00086 | . | 115 | 581 | Xyloglucan Fucosyltransferase1 | AT2G03220 | 65.7 | 3.3e-187 | 651.7 | |
| Lsi07g00815 | . | 55 | 510 | Xyloglucan Fucosyltransferase1 | AT2G03220 | 52.6 | 8.0e-141 | 497.7 | |
| Lsi04g00398 | . | 101 | 565 | Xyloglucan Fucosyltransferase1 | AT2G15350 | 54.4 | 2.2e-153 | 539.3 | |
| Lsi02g00086 | . | 95 | 584 | Xyloglucan Fucosyltransferase1 | AT2G15350 | 50.1 | 2.4e-144 | 509.2 | |
| Lsi04g00398 | . | 101 | 565 | Xyloglucan Fucosyltransferase1 | AT2G15370 | 53.9 | 1.1e-147 | 520.4 | |
| Lsi02g00086 | . | 106 | 584 | Xyloglucan Fucosyltransferase1 | AT2G15370 | 50.4 | 7.1e-139 | 491.1 | |
| Lsi04g00398 | . | 92 | 565 | Xyloglucan Fucosyltransferase1 | AT2G15390 | 54.7 | 7.4e-152 | 534.3 | |
| Lsi02g00086 | . | 115 | 583 | Xyloglucan Fucosyltransferase1 | AT2G15390 | 51.9 | 1.2e-141 | 500.4 | |
| Lsi05g00214 | . | 1 | 503 | Xyloglucan Fucosyltransferase1 | AT3G19280 | 61.0 | 5.6e-178 | 620.9 | |
| Lsi03g00496 | . | 1 | 472 | Xyloglucan Fucosyltransferase1 | AT3G19280 | 55.5 | 3.4e-143 | 505.4 | |
| Lsi04g00398 | . | 6 | 566 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 56.0 | 9.5e-182 | 633.6 | |
| Lsi02g00086 | . | 117 | 584 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 59.7 | 7.8e-168 | 587.4 | |
| Lsi07g00815 | . | 55 | 511 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 50.1 | 3.8e-130 | 462.2 | |
| Lsi04g00398 | . | 36 | 566 | Xyloglucan Fucosyltransferase1 | AT2G03220 | 63.4 | 1.4e-198 | 689.5 | |
| Lsi02g00086 | . | 115 | 581 | Xyloglucan Fucosyltransferase1 | AT2G03220 | 65.7 | 3.3e-187 | 651.7 | |
| Lsi07g00815 | . | 55 | 510 | Xyloglucan Fucosyltransferase1 | AT2G03220 | 52.6 | 8.0e-141 | 497.7 | |
| Lsi04g00398 | . | 6 | 566 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 56.0 | 9.5e-182 | 633.6 | |
| Lsi02g00086 | . | 117 | 584 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 59.7 | 7.8e-168 | 587.4 | |
| Lsi07g00815 | . | 55 | 511 | Xyloglucan Fucosyltransferase1 | AT2G03210 | 50.1 | 3.8e-130 | 462.2 | |
| Lsi04g00398 | . | 92 | 565 | Xyloglucan Fucosyltransferase1 | AT2G15390 | 54.7 | 7.4e-152 | 534.3 | |
| Lsi02g00086 | . | 115 | 583 | Xyloglucan Fucosyltransferase1 | AT2G15390 | 51.9 | 1.2e-141 | 500.4 | |
| Lsi04g00398 | . | 101 | 565 | Xyloglucan Fucosyltransferase1 | AT2G15370 | 53.9 | 1.1e-147 | 520.4 | |
| Lsi02g00086 | . | 106 | 584 | Xyloglucan Fucosyltransferase1 | AT2G15370 | 50.4 | 7.1e-139 | 491.1 | |
| Lsi04g00398 | . | 100 | 565 | Xyloglucan Fucosyltransferase1 | AT1G14080 | 57.3 | 9.0e-158 | 553.9 | |
| Lsi02g00086 | . | 113 | 582 | Xyloglucan Fucosyltransferase1 | AT1G14080 | 54.5 | 6.3e-151 | 531.2 | |
| Lsi07g00815 | . | 56 | 502 | Xyloglucan Fucosyltransferase1 | AT1G14080 | 50.6 | 5.2e-129 | 458.4 | |
| Lsi04g00398 | . | 80 | 566 | Xyloglucan Fucosyltransferase1 | AT1G14100 | 57.7 | 1.4e-163 | 573.2 | |
| Lsi02g00086 | . | 115 | 582 | Xyloglucan Fucosyltransferase1 | AT1G14100 | 58.0 | 2.9e-161 | 565.5 | |
| Lsi07g00815 | . | 56 | 505 | Xyloglucan Fucosyltransferase1 | AT1G14100 | 50.9 | 1.8e-134 | 476.5 | |
| Lsi04g00398 | . | 101 | 570 | Xyloglucan Fucosyltransferase1 | AT1G14110 | 53.7 | 1.0e-136 | 483.8 | |
| Lsi02g00086 | . | 112 | 585 | Xyloglucan Fucosyltransferase1 | AT1G14110 | 51.2 | 1.7e-131 | 466.5 | |
| Lsi04g00398 | . | 101 | 565 | Xyloglucan Fucosyltransferase1 | AT2G15350 | 54.4 | 2.2e-153 | 539.3 | |
| Lsi02g00086 | . | 95 | 584 | Xyloglucan Fucosyltransferase1 | AT2G15350 | 50.1 | 2.4e-144 | 509.2 | |
| Lsi05g00214 | . | 1 | 503 | Xyloglucan Fucosyltransferase1 | AT3G19280 | 61.0 | 5.6e-178 | 620.9 | |
| Lsi03g00496 | . | 1 | 472 | Xyloglucan Fucosyltransferase1 | AT3G19280 | 55.5 | 3.4e-143 | 505.4 | |
| Lsi05g00214 | . | 1 | 503 | Xyloglucan Fucosyltransferase1 | AT1G49710 | 62.0 | 7.3e-181 | 630.6 | |
| Lsi03g00496 | . | 1 | 472 | Xyloglucan Fucosyltransferase1 | AT1G49710 | 56.8 | 1.5e-146 | 516.5 | |
| Lsi08g00608 | . | 985 | 1388 | Xyloglucan Fucosyltransferase1 | AT1G71990 | 64.0 | 2.5e-152 | 535.4 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0014164 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 23 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lsi08g00608 | Lsi_Chr08 | FPKM | 2.789623 | 2.231192 | 0.834334 | 1.368423 | 2.07047 | 1.96987 | 2.136699 | 0.652696 | 0.301077 | 0.723995 |