Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi08g00691 ATGGAGGTTACCGGCAGCGGCGGCGACGCCGGCAGAGGAGAAAGTTCATCAAGCGAGAAACGGCGTCTTTCGCTCAGAGCAATTACAACCTCCTTCTGCATCGACGTACTGACCGGACCTTGGTTCATGGTGTTCGCTTCATTCCTAATTATGTCCACCGCCGGAACGCCGTACATGTTCGGCCTTTACTCCGGCGCCATAAAATCCGTCCTCGGGTACGATCAGAGCACTCTGAATTTAATCAGTTTTTTCAAAGACCTAGGAACGAACGTCGGCATAATTTCCGGCTTAATCGCCGAAATTACGCCGCCGTGGGTGGTTCTAGCGATCGGCGCAGCGATGAACTTCGTCGGATACTTCATGATTTGGCTGTCGGTGACGGAAAAAGTGGCGGCGCCGTCGGTGTGGCTGATGTGTCTTTACATTTGTTTAGGGGCAAATTCGACGGCGTTTGCGAACACCGGCGCTTTAGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCAGTTTTAGGGATTTTGAAAGGATATGTTGGATTAAGCGGAGCAATTTTGACGCAATTTTATCATGCGATTTATGGCGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTTATTTCTTTGGTGTTCTTGAGGACGATTCGGATTATTAAAGTTCAACATCAGCCTAATGAACTCAGAGTTTTTTACAGGTTCTTGTACGTTTCCCTTGGGCTTGCCGGATTTCTCATGGTGATGATCGTTCTTCAGCAGAAATTCAAATTCTCCCACATCGAATACAGTTCCAGCGCCGCCGTCGTCGTCTTTCTCCTCTCCTTTCCGATCTTCGTCGTCATCGCCGAAGACTACAAATTCTGGCGCAAAAAGCTATCTCAACTCCAAAATCCTTCTCCACTCACCATCATCACCCAAAAACCACCTCCGTCGCCGTCGCCGTCGCCGCCGCCGCAGCAGCAGTTCCCAATCAGCCTCGAAACCTCCGACACATCTCCCGCCGGAAAACCACAAACGCTATCCTGCTGGAGAACCGCCCTAAATCCGCCGCCAAGAGGGGAAGATCACACGATTCTACAAACGCTCTTCAGCGCCGATATGCTCCTCCTATTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGACAAATCGGCGCTTCTCTACAGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCCGAAATTTTCCTCACCAAATACAAATTCCCTCGAACCTTAATTCTTACCCTAATTCTCCTCCTCTCCTGCGTCGGCCACCTCCTAATCGCCTTTAATCCTCCCGGCGGCCTCTACGTCGCTTCAATCCTCATCGGATTCTGCTACGGCGCTCAATGGCCGATTCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACACTCTACAATTTCGGATCCGTTGCGAGTCCGATCGGGTTGTATTTCGTCAATGTTCGAGTCGCCGGACATTTGTACGACAAGGAGGCCAACCGGCAGCTGGCGGCGGCCGGGAGGACGAGGATAGCCGGAGAAGAGTTGAACTGCGTTGGCGTCAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACTTTGATTGGGGCTCTGTTTTCATTCATTTTGGTTCTTAGAACCAGAGGATTTTACAAGACTGATATTTATAGGAGGTTTAGGGATGAGGTTGAAGAAGAAGTAGCTGCTGGAAACGGCGTCGTTTCGAATGATGGGAGAAATGTGGAAGGCAACAAGTAG 1848 49.84 MEVTGSGGDAGRGESSSSEKRRLSLRAITTSFCIDVLTGPWFMVFASFLIMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGIISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPSVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAILTQFYHAIYGDDSKSLILLIAWLPAVISLVFLRTIRIIKVQHQPNELRVFYRFLYVSLGLAGFLMVMIVLQQKFKFSHIEYSSSAAVVVFLLSFPIFVVIAEDYKFWRKKLSQLQNPSPLTIITQKPPPSPSPSPPPQQQFPISLETSDTSPAGKPQTLSCWRTALNPPPRGEDHTILQTLFSADMLLLFLSTACGVGGTLTAIDNLGQIGASLQYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHLLIAFNPPGGLYVASILIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSVASPIGLYFVNVRVAGHLYDKEANRQLAAAGRTRIAGEELNCVGVNCFKMSFIIITGVTLIGALFSFILVLRTRGFYKTDIYRRFRDEVEEEVAAGNGVVSNDGRNVEGNK 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15212551 15216721 - Lsi08G006910.1 Lsi08g00691 668617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi08g00691 615 Gene3D MFS general substrate transporter like domains 367 581 IPR036259 -
Lsi08g00691 615 CDD MFS_Mch1p_like 39 567 - -
Lsi08g00691 615 MobiDBLite consensus disorder prediction 307 340 - -
Lsi08g00691 615 MobiDBLite consensus disorder prediction 326 340 - -
Lsi08g00691 615 SUPERFAMILY MFS general substrate transporter 40 580 IPR036259 -
Lsi08g00691 615 Pfam Major Facilitator Superfamily 393 576 IPR011701 GO:0022857|GO:0055085
Lsi08g00691 615 PANTHER MFS TRANSPORTER 28 599 - -
Lsi08g00691 615 MobiDBLite consensus disorder prediction 307 325 - -
Lsi08g00691 615 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 599 - -
Lsi08g00691 615 Pfam Nodulin-like 40 285 IPR010658 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Lsi04g00097 Lsi08g00691 CCT
Lsi04g00097 Lsi08g00691 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi04g00097 Lsi-Chr4:1111654 Lsi08g00691 Lsi-Chr8:15212551 0 dispersed
Lsi04g00100 Lsi-Chr4:1135466 Lsi08g00691 Lsi-Chr8:15212551 0 dispersed
Lsi01g02077 Lsi-Chr1:29277894 Lsi08g00691 Lsi-Chr8:15212551 1.06E-79 transposed
Lsi01g01296 Lsi-Chr1:11237794 Lsi08g00691 Lsi-Chr8:15212551 0 wgd
Lsi03g01994 Lsi-Chr3:31328766 Lsi08g00691 Lsi-Chr8:15212551 0 wgd
Lsi04g00096 Lsi-Chr4:1102253 Lsi08g00691 Lsi-Chr8:15212551 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi08g00691 - - csv:101208506 1006.51