Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lsi08g00776 ATGGGTGGTGGTGGCGGTGGCGGTGTGCAAAGTAGGGAGTTAGATCAAACTCCGACATGGGCCGTTGCCGCTGTTTGTGCAGTCATCATTCTTATTTCCATCATATTGGAAAAGGTTCTTCACATGGTTGGAGAGCTATTTCGAAGAAGGAAAAAGAAAGCATTGTATGAAGCACTTGAGAAAGTTAAAGGCGAACTTATGGTTTTAGGATTCATTTCTTTGCTCTTAACATTCGGACAAAATTATATTGCTCAAGTTTGTATACCCTCAAAGTATGCAAATACCATGTTGCCTTGCCCTTATAGAGGAGCTTTGCCTAAAAACACCCACGACATTGAGCCTGAAGATCATGATGAAGAGACTACCGATCACCACCGTAGGCTTCTTTGGTACGAGCATCGACGTCTTGGTGGCGGTGGTTCAGGGTATACACAACTTATATCTCTAAATGGTTTGCATCAAATACATATCTTCATCTTCTTTCTAGCCGTCCTCCATGTTGTATTTAGCGGCATAACAATGACTCTTGGGAGATTGAAAATTCGTGGGTGGAAGGTATGGGAAAGACAGACTGAACAAGAACATGACGCCATGAACGATCCTACAAGGTTCAGACTTACTCATGAGACATCCTTTGTAAGAGATCACAGCAGTTTTTGGACCAAAACACCCCTCTCCTTTTACTTTGTATGCTTCTTGAGGCAATTCTTCAGGTCCGTTAGTAGGGCAGATTACTTGTCTCTTAGACATGGTTTTGTCACTGTTCATTTAGCCCCTGGGAGTAAATTTGACTTTCAAAAGTATATCAAAAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTACTTCTCAATGTTAGTGGGTGGCAAGTTATGGTTTGGGTGTCCATATTTCCTCCAGTGGTAACAACTCTTAATACTCATTTAGTAATCTTAGCTGTTGGAACGAAGTTGCAAGGTATTATAACACAAATGGCTCTTGAAATCAAAGAAAGACATGCAGTGGTTCAAGGGATTCCCCTCGTCCAAGTCTCTGATAGACACTTCTGGTTTAGTTGGCCGGTTTTGGTGCTTTATCTTATACATTATGTCCTCTTCCAGTATGAATTTGGATTGAGATCATGCTTTCACGACAATTTTGATCTTATTATCAGTTGCCCTCGGATGGGATCAACAATGAAGAAATCCATATTTGATGAACAAACTTCAAAAGCATTGAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGGGGAAAGCCTGATCCATTGCCTATGCGAACTTTAGGAGGCGGCGGCAGTGGAGGAAGCCCTCCCGATTCACCGACACAACCCCCGCATGAATACCAACATCAATCGGTCCCTCAACCGTCGCCAACCGACGTGGAAGCCTCCGCCGTTCCTTCAGCTAACGTAATGACCACCATTGATCTCCAGCAACAACAACAGCAAAACTATGCCAATCGTGACTTGTTGAGCTGA 1488 43.01 MGGGGGGGVQSRELDQTPTWAVAAVCAVIILISIILEKVLHMVGELFRRRKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAQVCIPSKYANTMLPCPYRGALPKNTHDIEPEDHDEETTDHHRRLLWYEHRRLGGGGSGYTQLISLNGLHQIHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWERQTEQEHDAMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVCFLRQFFRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKSPLLWASMVLFLLLNVSGWQVMVWVSIFPPVVTTLNTHLVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQYEFGLRSCFHDNFDLIISCPRMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPDPLPMRTLGGGGSGGSPPDSPTQPPHEYQHQSVPQPSPTDVEASAVPSANVMTTIDLQQQQQQNYANRDLLS 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16142106 16149568 - Lsi08G007760.1 Lsi08g00776 668702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lsi08g00776 495 MobiDBLite consensus disorder prediction 411 472 - -
Lsi08g00776 495 MobiDBLite consensus disorder prediction 448 472 - -
Lsi08g00776 495 PANTHER MLO-LIKE PROTEIN 5-RELATED 6 430 - -
Lsi08g00776 495 Pfam Mlo family 12 384 IPR004326 GO:0006952|GO:0016021
Lsi08g00776 495 Pfam Mlo family 388 420 IPR004326 GO:0006952|GO:0016021
Lsi08g00776 495 PANTHER MLO-LIKE PROTEIN 1 6 430 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lsi02g01429 Lsi-Chr2:19828608 Lsi08g00776 Lsi-Chr8:16142106 7.03E-122 dispersed
Lsi07g01039 Lsi-Chr7:15744283 Lsi08g00776 Lsi-Chr8:16142106 3.16E-116 dispersed
Lsi08g00776 Lsi-Chr8:16142106 Lsi10g01281 Lsi-Chr10:17031805 2.41E-97 dispersed
Lsi10g00757 Lsi-Chr10:10378636 Lsi08g00776 Lsi-Chr8:16142106 2.97E-63 dispersed
Lsi01g00525 Lsi-Chr1:4298311 Lsi08g00776 Lsi-Chr8:16142106 2.18E-150 transposed
Lsi04g01324 Lsi-Chr4:21042641 Lsi08g00776 Lsi-Chr8:16142106 5.73E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lsi08g00776 K08472 - csv:101208890 785.793